CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr1G00430_001
(
Musa acuminata
)
E2F
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02319 (E2F_TDP)
IPR003316
GSMUA_Achr1G00430_001
T173165_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TFDP1
M08108_2.00
Homo sapiens
NSGCGGGAAVN
NBTTCCCGCSN
ChIP-seq
Mathelier et al.(2014)
MA1122.1
0.794
0.794
TFDP1
M09035_2.00
Homo sapiens
VRDDGGCGGGAMDN
NHKTCCCGCCHHYB
Misc
Kulakovskiy et al.(2013)
TFDP1_HUMAN.H11MO.0.C
0.794
0.794
dpl-1
M09525_2.00
Caenorhabditis elegans
GCGCGYHW
WDRCGCGC
Misc
Heinz et al.(2010)
cElegans-Adult_modEncode
0.721
0.721
For this family, TFs with SR scores >
0.429
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr1P00430_001
E2F
96
176
SGRGLRQFSMKVCEKVESKGRTTYNEVADELVTEFTDPNNNPGSQDQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKG
Links
Other
E2F
family TFs
Other
Musa acuminata
TFs
549 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_017_00683
Aquilegia coerulea
Aquca_017_00683
I
Aquca_034_00401
Aquilegia coerulea
Aquca_034_00401
I
LBD16
Arabidopsis lyrata
scaffold_403099.1
I
LBD16
Arabidopsis thaliana
AT2G42430
D
Bostr.25993s0538
Boechera stricta
Bostr.25993s0538
I
BRADI3G55680
Brachypodium distachyon
BRADI3G55680
I
Bo3g036000
Brassica oleracea
Bo3g036000
I
Bo3g036030
Brassica oleracea
Bo3g036030
I
Bo4g016000
Brassica oleracea
Bo4g016000
I
Bo4g191530
Brassica oleracea
Bo4g191530
I
Bra000257
Brassica rapa
Bra000257
I
Bra004693
Brassica rapa
Bra004693
I
Bra016877
Brassica rapa
Bra016877
I
Cagra.2636s0029
Capsella grandiflora
Cagra.2636s0029
I
Carubv10018619m.g
Capsella rubella
Carubv10018619m.g
I
Carubv10025548m.g
Capsella rubella
Carubv10025548m.g
I
evm.TU.supercontig_50.42
Carica papaya
evm.TU.supercontig_50.42
I
evm.TU.supercontig_50.43
Carica papaya
evm.TU.supercontig_50.43
I
Ca_12213
Cicer arietinum
Ca_12213
I
Cla006088
Citrullus lanatus
Cla006088
I
Ciclev10024416m.g
Citrus clementina
Ciclev10024416m.g
I
orange1.1g040761m.g
Citrus sinensis
orange1.1g040761m.g
I
Cucsa.053440
Cucumis sativus
Cucsa.053440
I
Eucgr.K03284
Eucalyptus grandis
Eucgr.K03284
I
Thhalv10006423m.g
Eutrema salsugineum
Thhalv10006423m.g
I
Thhalv10017158m.g
Eutrema salsugineum
Thhalv10017158m.g
I
gene08250-v1.0-hybrid
Fragaria vesca
gene08250-v1.0-hybrid
I
GLYMA03G31830
Glycine max
GLYMA03G31830
I
GLYMA10G04040
Glycine max
GLYMA10G04040
I
GLYMA10G04050
Glycine max
GLYMA10G04050
I
GLYMA13G18191
Glycine max
GLYMA13G18191
I
GLYMA13G18210
Glycine max
GLYMA13G18210
I
GLYMA19G34590
Glycine max
GLYMA19G34590
I
Gorai.001G251600
Gossypium raimondii
Gorai.001G251600
I
Gorai.001G251700
Gossypium raimondii
Gorai.001G251700
I
Gorai.004G073200
Gossypium raimondii
Gorai.004G073200
I
Gorai.004G073300
Gossypium raimondii
Gorai.004G073300
I
Gorai.004G073400
Gossypium raimondii
Gorai.004G073400
I
Gorai.004G219900
Gossypium raimondii
Gorai.004G219900
I
Gorai.004G220000
Gossypium raimondii
Gorai.004G220000
I
Gorai.007G144400
Gossypium raimondii
Gorai.007G144400
I
Gorai.008G114400
Gossypium raimondii
Gorai.008G114400
I
MLOC_10784
Hordeum vulgare
MLOC_10784
I
MLOC_61947
Hordeum vulgare
MLOC_61947
I
LPERR02G31040
Leersia perrieri
LPERR02G31040
I
LPERR03G03470
Leersia perrieri
LPERR03G03470
I
LPERR08G20530
Leersia perrieri
LPERR08G20530
I
Lus10000613.g
Linum usitatissimum
Lus10000613.g
I
Lus10000707.g
Linum usitatissimum
Lus10000707.g
I
Lus10014757.g
Linum usitatissimum
Lus10014757.g
I
Lus10024877.g
Linum usitatissimum
Lus10024877.g
I
Lus10033872.g
Linum usitatissimum
Lus10033872.g
I
MDP0000131964
Malus domestica
MDP0000131964
I
MDP0000145761
Malus domestica
MDP0000145761
I
cassava15612.m1
Manihot esculenta
cassava15612.m1
I
MTR_1g070220
Medicago truncatula
MTR_1g070220
I
MTR_7g096530
Medicago truncatula
MTR_7g096530
I
mgf020773m
Mimulus guttatus
mgf020773m
I
GSMUA_Achr1G01350_001
Musa acuminata
GSMUA_Achr1G01350_001
I
GSMUA_Achr3G27340_001
Musa acuminata
GSMUA_Achr3G27340_001
I
GSMUA_Achr4G25190_001
Musa acuminata
GSMUA_Achr4G25190_001
I
GSMUA_Achr5G13230_001
Musa acuminata
GSMUA_Achr5G13230_001
I
GSMUA_AchrUn_randomG23710_001
Musa acuminata
GSMUA_AchrUn_randomG23710_001
I
OBART03G03830
Oryza barthii
OBART03G03830
I
OBART08G23860
Oryza barthii
OBART08G23860
I
OB02G44330
Oryza brachyantha
OB02G44330
I
OB03G13890
Oryza brachyantha
OB03G13890
I
OB08G30680
Oryza brachyantha
OB08G30680
I
ORGLA02G0327800
Oryza glaberrima
ORGLA02G0327800
I
ORGLA03G0035900
Oryza glaberrima
ORGLA03G0035900
I
ORGLA08G0192400
Oryza glaberrima
ORGLA08G0192400
I
OGLUM02G38740
Oryza glumaepatula
OGLUM02G38740
I
OGLUM08G25340
Oryza glumaepatula
OGLUM08G25340
I
BGIOSGA005344
Oryza indica
BGIOSGA005344
I
BGIOSGA011445
Oryza indica
BGIOSGA011445
I
BGIOSGA026473
Oryza indica
BGIOSGA026473
I
OLONG_010223
Oryza longistaminata
OLONG_010223
I
OMERI02G35350
Oryza meridionalis
OMERI02G35350
I
OMERI07G01660
Oryza meridionalis
OMERI07G01660
I
OMERI08G18670
Oryza meridionalis
OMERI08G18670
I
ONIVA02G40360
Oryza nivara
ONIVA02G40360
I
ONIVA03G03580
Oryza nivara
ONIVA03G03580
I
ONIVA09G01330
Oryza nivara
ONIVA09G01330
I
OPUNC02G34750
Oryza punctata
OPUNC02G34750
I
OPUNC03G03520
Oryza punctata
OPUNC03G03520
I
OPUNC08G21770
Oryza punctata
OPUNC08G21770
I
ORUFI02G39110
Oryza rufipogon
ORUFI02G39110
I
ORUFI03G03550
Oryza rufipogon
ORUFI03G03550
I
ORUFI08G26340
Oryza rufipogon
ORUFI08G26340
I
OS02G0820500
Oryza sativa
OS02G0820500
I
OS03G0149100
Oryza sativa
OS03G0149100
I
OS08G0563400
Oryza sativa
OS08G0563400
I
Pavir.Aa00097
Panicum virgatum
Pavir.Aa00097
I
Pavir.Ia04220
Panicum virgatum
Pavir.Ia04220
I
Pavir.Ib00283
Panicum virgatum
Pavir.Ib00283
I
Pavir.J39638
Panicum virgatum
Pavir.J39638
I
PDK_20s1428661g002
Phoenix dactylifera
PDK_20s1428661g002
I
POPTR_0002s04200
Populus trichocarpa
POPTR_0002s04200
I
POPTR_0002s04210
Populus trichocarpa
POPTR_0002s04210
I
POPTR_0005s24320
Populus trichocarpa
POPTR_0005s24320
I
Pm020629
Prunus mume
Pm020629
I
PRUPE_ppa025349mg
Prunus persica
PRUPE_ppa025349mg
I
28428.m000040
Ricinus communis
28428.m000040
I
29883.m002035
Ricinus communis
29883.m002035
I
SapurV1A.0006s0980
Salix purpurea
SapurV1A.0006s0980
I
SapurV1A.0378s0180
Salix purpurea
SapurV1A.0378s0180
I
Si019578m.g
Setaria italica
Si019578m.g
I
Si040019m.g
Setaria italica
Si040019m.g
I
Solyc06g083930.1
Solanum lycopersicum
Solyc06g083930.1
I
Solyc09g066260.2
Solanum lycopersicum
Solyc09g066260.2
I
PGSC0003DMG400009713
Solanum tuberosum
PGSC0003DMG400009713
I
PGSC0003DMG400020069
Solanum tuberosum
PGSC0003DMG400020069
I
Sb01g046990
Sorghum bicolor
Sb01g046990
I
Sb04g037550
Sorghum bicolor
Sb04g037550
I
Sb07g023810
Sorghum bicolor
Sb07g023810
I
TCM_004106
Theobroma cacao
TCM_004106
I
Traes_4AL_CAF4E16B5
Triticum aestivum
Traes_4AL_CAF4E16B5
I
Traes_4BL_A4D0F4AD6
Triticum aestivum
Traes_4BL_A4D0F4AD6
I
Traes_4DL_43D63ABE3
Triticum aestivum
Traes_4DL_43D63ABE3
I
Traes_6AL_D6045E37C
Triticum aestivum
Traes_6AL_D6045E37C
I
Traes_6DL_850266B2A
Triticum aestivum
Traes_6DL_850266B2A
I
TRIUR3_01477
Triticum urartu
TRIUR3_01477
I
VIT_07s0005g03020
Vitis vinifera
VIT_07s0005g03020
I
LBD16
Vitis vinifera
VIT_07s0005g03030
I
GRMZM2G075499
Zea mays
GRMZM2G075499
I
GRMZM2G092542
Zea mays
GRMZM2G092542
I