GSMUA_Achr1G00430_001 (Musa acuminata)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02319 (E2F_TDP) IPR003316 GSMUA_Achr1G00430_001 T173165_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TFDP1
M08108_2.00 		Homo sapiens
NSGCGGGAAVN
NBTTCCCGCSN		 ChIP-seq
Mathelier et al.(2014)
MA1122.1 		0.794 0.794
TFDP1
M09035_2.00 		Homo sapiens
VRDDGGCGGGAMDN
NHKTCCCGCCHHYB		 Misc
Kulakovskiy et al.(2013)
TFDP1_HUMAN.H11MO.0.C 		0.794 0.794
dpl-1
M09525_2.00 		Caenorhabditis elegans
GCGCGYHW
WDRCGCGC		 Misc
Heinz et al.(2010)
cElegans-Adult_modEncode 		0.721 0.721
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr1P00430_001 E2F 96 176

Links

Other E2F family TFs
Other Musa acuminata TFs

549 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_017_00683 Aquilegia coerulea Aquca_017_00683 I
Aquca_034_00401 Aquilegia coerulea Aquca_034_00401 I
LBD16 Arabidopsis lyrata scaffold_403099.1 I
LBD16 Arabidopsis thaliana AT2G42430 D
Bostr.25993s0538 Boechera stricta Bostr.25993s0538 I
BRADI3G55680 Brachypodium distachyon BRADI3G55680 I
Bo3g036000 Brassica oleracea Bo3g036000 I
Bo3g036030 Brassica oleracea Bo3g036030 I
Bo4g016000 Brassica oleracea Bo4g016000 I
Bo4g191530 Brassica oleracea Bo4g191530 I
Bra000257 Brassica rapa Bra000257 I
Bra004693 Brassica rapa Bra004693 I
Bra016877 Brassica rapa Bra016877 I
Cagra.2636s0029 Capsella grandiflora Cagra.2636s0029 I
Carubv10018619m.g Capsella rubella Carubv10018619m.g I
Carubv10025548m.g Capsella rubella Carubv10025548m.g I
evm.TU.supercontig_50.42 Carica papaya evm.TU.supercontig_50.42 I
evm.TU.supercontig_50.43 Carica papaya evm.TU.supercontig_50.43 I
Ca_12213 Cicer arietinum Ca_12213 I
Cla006088 Citrullus lanatus Cla006088 I
Ciclev10024416m.g Citrus clementina Ciclev10024416m.g I
orange1.1g040761m.g Citrus sinensis orange1.1g040761m.g I
Cucsa.053440 Cucumis sativus Cucsa.053440 I
Eucgr.K03284 Eucalyptus grandis Eucgr.K03284 I
Thhalv10006423m.g Eutrema salsugineum Thhalv10006423m.g I
Thhalv10017158m.g Eutrema salsugineum Thhalv10017158m.g I
gene08250-v1.0-hybrid Fragaria vesca gene08250-v1.0-hybrid I
GLYMA03G31830 Glycine max GLYMA03G31830 I
GLYMA10G04040 Glycine max GLYMA10G04040 I
GLYMA10G04050 Glycine max GLYMA10G04050 I
GLYMA13G18191 Glycine max GLYMA13G18191 I
GLYMA13G18210 Glycine max GLYMA13G18210 I
GLYMA19G34590 Glycine max GLYMA19G34590 I
Gorai.001G251600 Gossypium raimondii Gorai.001G251600 I
Gorai.001G251700 Gossypium raimondii Gorai.001G251700 I
Gorai.004G073200 Gossypium raimondii Gorai.004G073200 I
Gorai.004G073300 Gossypium raimondii Gorai.004G073300 I
Gorai.004G073400 Gossypium raimondii Gorai.004G073400 I
Gorai.004G219900 Gossypium raimondii Gorai.004G219900 I
Gorai.004G220000 Gossypium raimondii Gorai.004G220000 I
Gorai.007G144400 Gossypium raimondii Gorai.007G144400 I
Gorai.008G114400 Gossypium raimondii Gorai.008G114400 I
MLOC_10784 Hordeum vulgare MLOC_10784 I
MLOC_61947 Hordeum vulgare MLOC_61947 I
LPERR02G31040 Leersia perrieri LPERR02G31040 I
LPERR03G03470 Leersia perrieri LPERR03G03470 I
LPERR08G20530 Leersia perrieri LPERR08G20530 I
Lus10000613.g Linum usitatissimum Lus10000613.g I
Lus10000707.g Linum usitatissimum Lus10000707.g I
Lus10014757.g Linum usitatissimum Lus10014757.g I
Lus10024877.g Linum usitatissimum Lus10024877.g I
Lus10033872.g Linum usitatissimum Lus10033872.g I
MDP0000131964 Malus domestica MDP0000131964 I
MDP0000145761 Malus domestica MDP0000145761 I
cassava15612.m1 Manihot esculenta cassava15612.m1 I
MTR_1g070220 Medicago truncatula MTR_1g070220 I
MTR_7g096530 Medicago truncatula MTR_7g096530 I
mgf020773m Mimulus guttatus mgf020773m I
GSMUA_Achr1G01350_001 Musa acuminata GSMUA_Achr1G01350_001 I
GSMUA_Achr3G27340_001 Musa acuminata GSMUA_Achr3G27340_001 I
GSMUA_Achr4G25190_001 Musa acuminata GSMUA_Achr4G25190_001 I
GSMUA_Achr5G13230_001 Musa acuminata GSMUA_Achr5G13230_001 I
GSMUA_AchrUn_randomG23710_001 Musa acuminata GSMUA_AchrUn_randomG23710_001 I
OBART03G03830 Oryza barthii OBART03G03830 I
OBART08G23860 Oryza barthii OBART08G23860 I
OB02G44330 Oryza brachyantha OB02G44330 I
OB03G13890 Oryza brachyantha OB03G13890 I
OB08G30680 Oryza brachyantha OB08G30680 I
ORGLA02G0327800 Oryza glaberrima ORGLA02G0327800 I
ORGLA03G0035900 Oryza glaberrima ORGLA03G0035900 I
ORGLA08G0192400 Oryza glaberrima ORGLA08G0192400 I
OGLUM02G38740 Oryza glumaepatula OGLUM02G38740 I
OGLUM08G25340 Oryza glumaepatula OGLUM08G25340 I
BGIOSGA005344 Oryza indica BGIOSGA005344 I
BGIOSGA011445 Oryza indica BGIOSGA011445 I
BGIOSGA026473 Oryza indica BGIOSGA026473 I
OLONG_010223 Oryza longistaminata OLONG_010223 I
OMERI02G35350 Oryza meridionalis OMERI02G35350 I
OMERI07G01660 Oryza meridionalis OMERI07G01660 I
OMERI08G18670 Oryza meridionalis OMERI08G18670 I
ONIVA02G40360 Oryza nivara ONIVA02G40360 I
ONIVA03G03580 Oryza nivara ONIVA03G03580 I
ONIVA09G01330 Oryza nivara ONIVA09G01330 I
OPUNC02G34750 Oryza punctata OPUNC02G34750 I
OPUNC03G03520 Oryza punctata OPUNC03G03520 I
OPUNC08G21770 Oryza punctata OPUNC08G21770 I
ORUFI02G39110 Oryza rufipogon ORUFI02G39110 I
ORUFI03G03550 Oryza rufipogon ORUFI03G03550 I
ORUFI08G26340 Oryza rufipogon ORUFI08G26340 I
OS02G0820500 Oryza sativa OS02G0820500 I
OS03G0149100 Oryza sativa OS03G0149100 I
OS08G0563400 Oryza sativa OS08G0563400 I
Pavir.Aa00097 Panicum virgatum Pavir.Aa00097 I
Pavir.Ia04220 Panicum virgatum Pavir.Ia04220 I
Pavir.Ib00283 Panicum virgatum Pavir.Ib00283 I
Pavir.J39638 Panicum virgatum Pavir.J39638 I
PDK_20s1428661g002 Phoenix dactylifera PDK_20s1428661g002 I
POPTR_0002s04200 Populus trichocarpa POPTR_0002s04200 I
POPTR_0002s04210 Populus trichocarpa POPTR_0002s04210 I
POPTR_0005s24320 Populus trichocarpa POPTR_0005s24320 I
Pm020629 Prunus mume Pm020629 I
PRUPE_ppa025349mg Prunus persica PRUPE_ppa025349mg I
28428.m000040 Ricinus communis 28428.m000040 I
29883.m002035 Ricinus communis 29883.m002035 I
SapurV1A.0006s0980 Salix purpurea SapurV1A.0006s0980 I
SapurV1A.0378s0180 Salix purpurea SapurV1A.0378s0180 I
Si019578m.g Setaria italica Si019578m.g I
Si040019m.g Setaria italica Si040019m.g I
Solyc06g083930.1 Solanum lycopersicum Solyc06g083930.1 I
Solyc09g066260.2 Solanum lycopersicum Solyc09g066260.2 I
PGSC0003DMG400009713 Solanum tuberosum PGSC0003DMG400009713 I
PGSC0003DMG400020069 Solanum tuberosum PGSC0003DMG400020069 I
Sb01g046990 Sorghum bicolor Sb01g046990 I
Sb04g037550 Sorghum bicolor Sb04g037550 I
Sb07g023810 Sorghum bicolor Sb07g023810 I
TCM_004106 Theobroma cacao TCM_004106 I
Traes_4AL_CAF4E16B5 Triticum aestivum Traes_4AL_CAF4E16B5 I
Traes_4BL_A4D0F4AD6 Triticum aestivum Traes_4BL_A4D0F4AD6 I
Traes_4DL_43D63ABE3 Triticum aestivum Traes_4DL_43D63ABE3 I
Traes_6AL_D6045E37C Triticum aestivum Traes_6AL_D6045E37C I
Traes_6DL_850266B2A Triticum aestivum Traes_6DL_850266B2A I
TRIUR3_01477 Triticum urartu TRIUR3_01477 I
VIT_07s0005g03020 Vitis vinifera VIT_07s0005g03020 I
LBD16 Vitis vinifera VIT_07s0005g03030 I
GRMZM2G075499 Zea mays GRMZM2G075499 I
GRMZM2G092542 Zea mays GRMZM2G092542 I