MTR_1g070220 (Medicago truncatula)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 MTR_1g070220 T245434_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD16
M00870_2.00 		Arabidopsis thaliana
DNHHYVCGG
CCGBRDDNH		 PBM
Franco-Zorrilla et al.(2014)
LBD16 		0.818 0.818
LBD16
M06958_2.00 		Arabidopsis thaliana
SCGGAAAWNVCGSMR
YKSCGBNWTTTCCGS		 Dap-seq
OMalley et al.(2016)
ASL18_col_a 		0.818 0.818
LBD16
M06959_2.00 		Arabidopsis thaliana
SCDBDWTTYVCGSHDN
NHDSCGBRAAWHVHGS		 Dap-seq
OMalley et al.(2016)
ASL18_colamp_a 		0.818 0.818
LBD18
M06962_2.00 		Arabidopsis thaliana
SCGGRRAWHVHGSMRNNDN
NHNNYKSCDBDWTYYCCGS		 Dap-seq
OMalley et al.(2016)
LBD18_col_a 		0.727 0.727
LBD18
M06963_2.00 		Arabidopsis thaliana
CDBDWTTTMHGSHRN
NYDSCDKAAAWHVHG		 Dap-seq
OMalley et al.(2016)
LBD18_colamp_a 		0.727 0.727
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH42569 LOB 15 114

Links

Other LOB family TFs
Other Medicago truncatula TFs

244 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pm020629 Prunus mume Pm020629 I 0.859
evm.TU.supercontig_50.43 Carica papaya evm.TU.supercontig_50.43 I 0.859
gene08250-v1.0-hybrid Fragaria vesca gene08250-v1.0-hybrid I 0.859
GLYMA19G34590 Glycine max GLYMA19G34590 I 0.848
PRUPE_ppa025349mg Prunus persica PRUPE_ppa025349mg I 0.848
TCM_004106 Theobroma cacao TCM_004106 I 0.848
cassava15612.m1 Manihot esculenta cassava15612.m1 I 0.848
Ciclev10024416m.g Citrus clementina Ciclev10024416m.g I 0.848
orange1.1g040761m.g Citrus sinensis orange1.1g040761m.g I 0.848
GLYMA03G31830 Glycine max GLYMA03G31830 I 0.838
POPTR_0005s24320 Populus trichocarpa POPTR_0005s24320 I 0.838
Ca_12213 Cicer arietinum Ca_12213 I 0.838
29883.m002035 Ricinus communis 29883.m002035 I 0.838
MDP0000145761 Malus domestica MDP0000145761 I 0.838
Bo4g016000 Brassica oleracea Bo4g016000 I 0.828
Bo4g191530 Brassica oleracea Bo4g191530 I 0.828
Bra004693 Brassica rapa Bra004693 I 0.828
Bra016877 Brassica rapa Bra016877 I 0.828
MTR_7g096530 Medicago truncatula MTR_7g096530 I 0.828
POPTR_0002s04210 Populus trichocarpa POPTR_0002s04210 I 0.828
Bostr.25993s0538 Boechera stricta Bostr.25993s0538 I 0.828
Gorai.001G251600 Gossypium raimondii Gorai.001G251600 I 0.828
MDP0000131964 Malus domestica MDP0000131964 I 0.828
SapurV1A.0378s0180 Salix purpurea SapurV1A.0378s0180 I 0.828
Thhalv10017158m.g Eutrema salsugineum Thhalv10017158m.g I 0.828
LBD16 Arabidopsis thaliana AT2G42430 D 0.818
PGSC0003DMG400009713 Solanum tuberosum PGSC0003DMG400009713 I 0.818
LBD16 Arabidopsis lyrata scaffold_403099.1 I 0.818
LBD16 Vitis vinifera VIT_07s0005g03030 I 0.818
Cla006088 Citrullus lanatus Cla006088 I 0.818
Aquca_034_00401 Aquilegia coerulea Aquca_034_00401 I 0.818
Cagra.2636s0029 Capsella grandiflora Cagra.2636s0029 I 0.818
Carubv10025548m.g Capsella rubella Carubv10025548m.g I 0.818
Gorai.004G073400 Gossypium raimondii Gorai.004G073400 I 0.818
Gorai.007G144400 Gossypium raimondii Gorai.007G144400 I 0.818
SapurV1A.0006s0980 Salix purpurea SapurV1A.0006s0980 I 0.818
Cucsa.053440 Cucumis sativus Cucsa.053440 I 0.808
PDK_20s1428661g002 Phoenix dactylifera PDK_20s1428661g002 I 0.808
Bo3g036030 Brassica oleracea Bo3g036030 I 0.798
Bra000257 Brassica rapa Bra000257 I 0.798
GSMUA_Achr3G27340_001 Musa acuminata GSMUA_Achr3G27340_001 I 0.798
Solyc09g066260.2 Solanum lycopersicum Solyc09g066260.2 I 0.798
Solyc06g083930.1 Solanum lycopersicum Solyc06g083930.1 I 0.788
Aquca_017_00683 Aquilegia coerulea Aquca_017_00683 I 0.788
Lus10024877.g Linum usitatissimum Lus10024877.g I 0.778
GLYMA10G04040 Glycine max GLYMA10G04040 I 0.768
OB02G44330 Oryza brachyantha OB02G44330 I 0.768
PGSC0003DMG400020069 Solanum tuberosum PGSC0003DMG400020069 I 0.768
Carubv10018619m.g Capsella rubella Carubv10018619m.g I 0.768
Eucgr.K03284 Eucalyptus grandis Eucgr.K03284 I 0.768
Gorai.004G219900 Gossypium raimondii Gorai.004G219900 I 0.768
Lus10033872.g Linum usitatissimum Lus10033872.g I 0.768
Bo3g036000 Brassica oleracea Bo3g036000 I 0.763
BGIOSGA005344 Oryza indica BGIOSGA005344 I 0.758
GLYMA13G18191 Glycine max GLYMA13G18191 I 0.758
GRMZM2G075499 Zea mays GRMZM2G075499 I 0.758
LPERR02G31040 Leersia perrieri LPERR02G31040 I 0.758
OGLUM02G38740 Oryza glumaepatula OGLUM02G38740 I 0.758
OMERI02G35350 Oryza meridionalis OMERI02G35350 I 0.758
ONIVA02G40360 Oryza nivara ONIVA02G40360 I 0.758
ORGLA02G0327800 Oryza glaberrima ORGLA02G0327800 I 0.758
ORUFI02G39110 Oryza rufipogon ORUFI02G39110 I 0.758
OS02G0820500 Oryza sativa OS02G0820500 I 0.758
Sb04g037550 Sorghum bicolor Sb04g037550 I 0.758
LBD20 Vitis vinifera VIT_08s0056g01650 I 0.758
Cagra.0686s0035 Capsella grandiflora Cagra.0686s0035 I 0.758
Pavir.Aa00097 Panicum virgatum Pavir.Aa00097 I 0.758
Pavir.J39638 Panicum virgatum Pavir.J39638 I 0.758
GSMUA_Achr1G01350_001 Musa acuminata GSMUA_Achr1G01350_001 I 0.747
OPUNC02G34750 Oryza punctata OPUNC02G34750 I 0.747
PRUPE_ppa010383mg Prunus persica PRUPE_ppa010383mg I 0.747
Si019578m.g Setaria italica Si019578m.g I 0.747
Cla007068 Citrullus lanatus Cla007068 I 0.747
Pm017936 Prunus mume Pm017936 I 0.747
Cucsa.362840 Cucumis sativus Cucsa.362840 I 0.747
Aquca_009_00560 Aquilegia coerulea Aquca_009_00560 I 0.747
Lus10000707.g Linum usitatissimum Lus10000707.g I 0.747
TCM_005496 Theobroma cacao TCM_005496 I 0.739
LBD20 Arabidopsis thaliana AT3G03760 I 0.737
BGIOSGA011118 Oryza indica BGIOSGA011118 I 0.737
Bo1g153580 Brassica oleracea Bo1g153580 I 0.737
Bra036436 Brassica rapa Bra036436 I 0.737
Bra040311 Brassica rapa Bra040311 I 0.737
LBD20 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000301 I 0.737
GLYMA01G34540 Glycine max GLYMA01G34540 I 0.737
GRMZM2G110913 Zea mays GRMZM2G110913 I 0.737
GRMZM2G150594 Zea mays GRMZM2G150594 I 0.737
GSMUA_AchrUn_randomG10470_001 Musa acuminata GSMUA_AchrUn_randomG10470_001 I 0.737
LPERR03G09330 Leersia perrieri LPERR03G09330 I 0.737
MLOC_55239 Hordeum vulgare MLOC_55239 I 0.737
OBART03G10450 Oryza barthii OBART03G10450 I 0.737
OGLUM03G10340 Oryza glumaepatula OGLUM03G10340 I 0.737
OMERI03G09680 Oryza meridionalis OMERI03G09680 I 0.737
OPUNC03G10080 Oryza punctata OPUNC03G10080 I 0.737
ORGLA03G0100400 Oryza glaberrima ORGLA03G0100400 I 0.737
ORUFI03G10670 Oryza rufipogon ORUFI03G10670 I 0.737
OS03G0246900 Oryza sativa OS03G0246900 I 0.737
PRUPE_ppa019939mg Prunus persica PRUPE_ppa019939mg I 0.737
Sb01g041130 Sorghum bicolor Sb01g041130 I 0.737
TCM_025849 Theobroma cacao TCM_025849 I 0.737
Traes_4AS_5971FF832 Triticum aestivum Traes_4AS_5971FF832 I 0.737
Traes_4DL_A2012EA68 Triticum aestivum Traes_4DL_A2012EA68 I 0.737
VIT_07s0005g03020 Vitis vinifera VIT_07s0005g03020 I 0.737
Cla002965 Citrullus lanatus Cla002965 I 0.737
Pm020627 Prunus mume Pm020627 I 0.737
30174.m008898 Ricinus communis 30174.m008898 I 0.737
cassava15337.m1 Manihot esculenta cassava15337.m1 I 0.737
cassava28659.m1 Manihot esculenta cassava28659.m1 I 0.737
cassava36912.valid.m1 Manihot esculenta cassava36912.valid.m1 I 0.737
Bostr.19046s0098 Boechera stricta Bostr.19046s0098 I 0.737
Cagra.2098s0013 Capsella grandiflora Cagra.2098s0013 I 0.737
Carubv10015417m.g Capsella rubella Carubv10015417m.g I 0.737
Ciclev10021843m.g Citrus clementina Ciclev10021843m.g I 0.737
Ciclev10021992m.g Citrus clementina Ciclev10021992m.g I 0.737
Eucgr.E01414 Eucalyptus grandis Eucgr.E01414 I 0.737
Gorai.008G114400 Gossypium raimondii Gorai.008G114400 I 0.737
Lus10014757.g Linum usitatissimum Lus10014757.g I 0.737
orange1.1g036534m.g Citrus sinensis orange1.1g036534m.g I 0.737
orange1.1g042813m.g Citrus sinensis orange1.1g042813m.g I 0.737
Pavir.J34872 Panicum virgatum Pavir.J34872 I 0.737
Thhalv10021301m.g Eutrema salsugineum Thhalv10021301m.g I 0.737
LjT35F15.70.nd Lotus japonicus LjT35F15.70.nd I 0.737
gw1.42.84.1 Physcomitrella patens gw1.42.84.1 I 0.736
POPTR_0047s00280 Populus trichocarpa POPTR_0047s00280 I 0.731
LBD18 Arabidopsis thaliana AT2G45420 D 0.727
Bo4g024620 Brassica oleracea Bo4g024620 I 0.727
Bo4g195520 Brassica oleracea Bo4g195520 I 0.727
BRADI1G68170 Brachypodium distachyon BRADI1G68170 I 0.727
BRADI3G22510 Brachypodium distachyon BRADI3G22510 I 0.727
LBD18 Arabidopsis lyrata fgenesh2_kg.4__2737__AT2G45420.1 I 0.727
GLYMA03G02620 Glycine max GLYMA03G02620 I 0.727
GSMUA_Achr5G11330_001 Musa acuminata GSMUA_Achr5G11330_001 I 0.727
GSMUA_Achr5G13230_001 Musa acuminata GSMUA_Achr5G13230_001 I 0.727
GSMUA_AchrUn_randomG23710_001 Musa acuminata GSMUA_AchrUn_randomG23710_001 I 0.727
MLOC_61947 Hordeum vulgare MLOC_61947 I 0.727
PRUPE_ppa024802mg Prunus persica PRUPE_ppa024802mg I 0.727
Traes_4BL_3FB579782 Triticum aestivum Traes_4BL_3FB579782 I 0.727
Traes_6AL_D6045E37C Triticum aestivum Traes_6AL_D6045E37C I 0.727
TRIUR3_01477 Triticum urartu TRIUR3_01477 I 0.727
LBD30 Vitis vinifera VIT_15s0048g00830 I 0.727
Pm028642 Prunus mume Pm028642 I 0.727
30072.m000955 Ricinus communis 30072.m000955 I 0.727
cassava25975.m1 Manihot esculenta cassava25975.m1 I 0.727
gw1.61.81.1 Physcomitrella patens gw1.61.81.1 I 0.727
Aquca_013_00580 Aquilegia coerulea Aquca_013_00580 I 0.727
Bostr.25993s0233 Boechera stricta Bostr.25993s0233 I 0.727
Cagra.0698s0021 Capsella grandiflora Cagra.0698s0021 I 0.727
Carubv10025050m.g Capsella rubella Carubv10025050m.g I 0.727
Eucgr.B01529 Eucalyptus grandis Eucgr.B01529 I 0.727
gene08253-v1.0-hybrid Fragaria vesca gene08253-v1.0-hybrid I 0.727
Gorai.004G161100 Gossypium raimondii Gorai.004G161100 I 0.727
MDP0000322059 Malus domestica MDP0000322059 I 0.727
SapurV1A.0024s0780 Salix purpurea SapurV1A.0024s0780 I 0.727
SapurV1A.0532s0190 Salix purpurea SapurV1A.0532s0190 I 0.727
Thhalv10001791m.g Eutrema salsugineum Thhalv10001791m.g I 0.727
Thhalv10006423m.g Eutrema salsugineum Thhalv10006423m.g I 0.727
PGSC0003DMG402012772 Solanum tuberosum PGSC0003DMG402012772 I 0.723
AMTR_s00041p00044170 Amborella trichopoda AMTR_s00041p00044170 I 0.717
BGIOSGA011445 Oryza indica BGIOSGA011445 I 0.717
Bra004910 Brassica rapa Bra004910 I 0.717
GLYMA09G40500 Glycine max GLYMA09G40500 I 0.717
GLYMA10G04050 Glycine max GLYMA10G04050 I 0.717
GLYMA13G18210 Glycine max GLYMA13G18210 I 0.717
GRMZM2G092542 Zea mays GRMZM2G092542 I 0.717
GSMUA_Achr1G02520_001 Musa acuminata GSMUA_Achr1G02520_001 I 0.717
GSMUA_Achr1G06580_001 Musa acuminata GSMUA_Achr1G06580_001 I 0.717
LPERR03G03470 Leersia perrieri LPERR03G03470 I 0.717
MLOC_10784 Hordeum vulgare MLOC_10784 I 0.717
OB03G13890 Oryza brachyantha OB03G13890 I 0.717
OB08G30680 Oryza brachyantha OB08G30680 I 0.717
OBART03G03830 Oryza barthii OBART03G03830 I 0.717
OMERI07G01660 Oryza meridionalis OMERI07G01660 I 0.717
ONIVA03G03580 Oryza nivara ONIVA03G03580 I 0.717
OPUNC03G03520 Oryza punctata OPUNC03G03520 I 0.717
ORGLA03G0035900 Oryza glaberrima ORGLA03G0035900 I 0.717
ORUFI03G03550 Oryza rufipogon ORUFI03G03550 I 0.717
OS03G0149100 Oryza sativa OS03G0149100 I 0.717
POPTR_0002s04200 Populus trichocarpa POPTR_0002s04200 I 0.717
POPTR_0013s06070 Populus trichocarpa POPTR_0013s06070 I 0.717
Sb01g046990 Sorghum bicolor Sb01g046990 I 0.717
Si040019m.g Setaria italica Si040019m.g I 0.717
Solyc01g091420.1 Solanum lycopersicum Solyc01g091420.1 I 0.717
Traes_4AL_CAF4E16B5 Triticum aestivum Traes_4AL_CAF4E16B5 I 0.717
Traes_4BL_A4D0F4AD6 Triticum aestivum Traes_4BL_A4D0F4AD6 I 0.717
Traes_4DL_43D63ABE3 Triticum aestivum Traes_4DL_43D63ABE3 I 0.717
Traes_6DL_850266B2A Triticum aestivum Traes_6DL_850266B2A I 0.717
Pm020628 Prunus mume Pm020628 I 0.717
28428.m000040 Ricinus communis 28428.m000040 I 0.717
Cucsa.338130 Cucumis sativus Cucsa.338130 I 0.717
mgf006429m Mimulus guttatus mgf006429m I 0.717
mgf020773m Mimulus guttatus mgf020773m I 0.717
evm.TU.supercontig_50.42 Carica papaya evm.TU.supercontig_50.42 I 0.717
gene24461-v1.0-hybrid Fragaria vesca gene24461-v1.0-hybrid I 0.717
Gorai.007G346200 Gossypium raimondii Gorai.007G346200 I 0.717
Lus10000613.g Linum usitatissimum Lus10000613.g I 0.717
Pavir.Ia04220 Panicum virgatum Pavir.Ia04220 I 0.717
Pavir.Ib00283 Panicum virgatum Pavir.Ib00283 I 0.717
BGIOSGA026473 Oryza indica BGIOSGA026473 I 0.707
BRADI1G75110 Brachypodium distachyon BRADI1G75110 I 0.707
BRADI3G55680 Brachypodium distachyon BRADI3G55680 I 0.707
GLYMA18G45320 Glycine max GLYMA18G45320 I 0.707
GLYMA19G34600 Glycine max GLYMA19G34600 I 0.707
GSMUA_Achr1G01360_001 Musa acuminata GSMUA_Achr1G01360_001 I 0.707
GSMUA_Achr2G11240_001 Musa acuminata GSMUA_Achr2G11240_001 I 0.707
GSMUA_AchrUn_randomG07730_001 Musa acuminata GSMUA_AchrUn_randomG07730_001 I 0.707
LPERR08G20530 Leersia perrieri LPERR08G20530 I 0.707
MLOC_52276 Hordeum vulgare MLOC_52276 I 0.707
MTR_7g096610 Medicago truncatula MTR_7g096610 I 0.707
OBART08G23860 Oryza barthii OBART08G23860 I 0.707
OGLUM08G25340 Oryza glumaepatula OGLUM08G25340 I 0.707
OLONG_010223 Oryza longistaminata OLONG_010223 I 0.707
OMERI08G18670 Oryza meridionalis OMERI08G18670 I 0.707
ONIVA09G01330 Oryza nivara ONIVA09G01330 I 0.707
OPUNC08G21770 Oryza punctata OPUNC08G21770 I 0.707
ORGLA08G0192400 Oryza glaberrima ORGLA08G0192400 I 0.707
ORUFI08G26340 Oryza rufipogon ORUFI08G26340 I 0.707
OS08G0563400 Oryza sativa OS08G0563400 I 0.707
PGSC0003DMG400009716 Solanum tuberosum PGSC0003DMG400009716 I 0.707
PGSC0003DMG400022454 Solanum tuberosum PGSC0003DMG400022454 I 0.707
PRUPE_ppa017589mg Prunus persica PRUPE_ppa017589mg I 0.707
PRUPE_ppa025889mg Prunus persica PRUPE_ppa025889mg I 0.707
Solyc09g066270.2 Solanum lycopersicum Solyc09g066270.2 I 0.707
Cla006087 Citrullus lanatus Cla006087 I 0.707
Pm017935 Prunus mume Pm017935 I 0.707
cassava40664.m1 Manihot esculenta cassava40664.m1 I 0.707
cassava41632.m1 Manihot esculenta cassava41632.m1 I 0.707
Cucsa.053450 Cucumis sativus Cucsa.053450 I 0.707
gw1.261.12.1 Physcomitrella patens gw1.261.12.1 I 0.707
Aquca_013_00578 Aquilegia coerulea Aquca_013_00578 I 0.707
Aquca_034_00400 Aquilegia coerulea Aquca_034_00400 I 0.707
Ciclev10023341m.g Citrus clementina Ciclev10023341m.g I 0.707
Eucgr.K01522 Eucalyptus grandis Eucgr.K01522 I 0.707
gene08254-v1.0-hybrid Fragaria vesca gene08254-v1.0-hybrid I 0.707
Gorai.001G251700 Gossypium raimondii Gorai.001G251700 I 0.707
Gorai.004G073200 Gossypium raimondii Gorai.004G073200 I 0.707
Gorai.004G073300 Gossypium raimondii Gorai.004G073300 I 0.707
Gorai.007G144500 Gossypium raimondii Gorai.007G144500 I 0.707
Lus10033873.g Linum usitatissimum Lus10033873.g I 0.707
MDP0000429067 Malus domestica MDP0000429067 I 0.707
orange1.1g027399m.g Citrus sinensis orange1.1g027399m.g I 0.707
Pavir.Ia02614 Panicum virgatum Pavir.Ia02614 I 0.707
SapurV1A.0006s0970 Salix purpurea SapurV1A.0006s0970 I 0.707
chr5.CM0494.160.nd Lotus japonicus chr5.CM0494.160.nd I 0.707
LjSGA_002536.2 Lotus japonicus LjSGA_002536.2 I 0.707