PRUPE_ppa001511mg (Prunus persica)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03101 (FAR1) IPR004330 PRUPE_ppa001511mg T180122_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FAR1
M06880_2.00 		Arabidopsis thaliana
NNYHCACGCGCYDNH
DNHRGCGCGTGDRNN		 Dap-seq
OMalley et al.(2016)
FAR1_col_a 		0.886 0.886
FAR1
M06881_2.00 		Arabidopsis thaliana
NNNNBDNDNNYHCACGCGCYD
HRGCGCGTGDRNNHNHVNNNN		 Dap-seq
OMalley et al.(2016)
FAR1_colamp_a 		0.886 0.886
FHY3
M08114_2.00 		Arabidopsis thaliana
NHCACGCGCTNN
NNAGCGCGTGDN		 ChIP-seq
Mathelier et al.(2014)
MA0557.1 		0.705 0.705
FHY3
M09540_2.00 		Arabidopsis thaliana
NHSACGCGCBNN
NNVGCGCGTSDN		 Misc
Heinz et al.(2010)
Arabidopsis-FHY3_GSE30711 		0.705 0.705
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMJ18353 FAR1 48 135

Links

Other FAR1 family TFs
Other Prunus persica TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCDUO_17222 Ancylostoma duodenale ANCDUO_17222 N
GPLIN_000554300 Globodera pallida GPLIN_000554300 N
maker-nMf.1.1.scaf00641-snap-gene-0.11 Meloidogyne floridensis maker-nMf.1.1.scaf00641-snap-gene-0.11 N
snap_masked-nMf.1.1.scaf31837-processed-gene-0.1 Meloidogyne floridensis snap_masked-nMf.1.1.scaf31837-processed-gene-0.1 N
NECAME_00548 Necator americanus NECAME_00548 N
NBR_0000655401 Nippostrongylus brasiliensis NBR_0000655401 N
SROB_0000835501 Schistosoma rodhaini SROB_0000835501 N