CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si029002m.g
(
Setaria italica
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
Si029002m.g
T180416_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si029002m
FAR1
53
141
RLYCDYGHRIGFSVRKGKQSYFIGTKNIRTKDYYCSKEGLKYDEPVTEANFNRPDTRTNCKAMIRFRVDEKGRWTVIRFVPVHNHQLAK
Si029004m
FAR1
53
141
RLYCDYGHRIGFSVRKGKQSYFIGTKNIRTKDYYCSKEGLKYDEPVTEANFNRPDTRTNCKAMIRFRVDEKGRWTVIRFVPVHNHQLAK
Si029007m
FAR1
53
141
RLYCDYGHRIGFSVRKGKQSYFIGTKNIRTKDYYCSKEGLKYDEPVTEANFNRPDTRTNCKAMIRFRVDEKGRWTVIRFVPVHNHQLAK
Links
Other
FAR1
family TFs
Other
Setaria italica
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_16855
Aegilops tauschii
F775_16855
I
F775_24386
Aegilops tauschii
F775_24386
I
TGA10
Arabidopsis lyrata
fgenesh2_kg.6__632__AT5G06839.2
I
PAN
Arabidopsis lyrata
fgenesh2_kg.2__1120__AT1G68640.1
I
TGA10
Arabidopsis thaliana
AT5G06839
D
Bostr.13129s0288
Boechera stricta
Bostr.13129s0288
I
Bostr.26959s0025
Boechera stricta
Bostr.26959s0025
I
Bo9g175780
Brassica oleracea
Bo9g175780
I
Bo3g004060
Brassica oleracea
Bo3g004060
I
Cagra.8005s0020
Capsella grandiflora
Cagra.8005s0020
I
Carubv10003744m.g
Capsella rubella
Carubv10003744m.g
I
Ciclev10031441m.g
Citrus clementina
Ciclev10031441m.g
I
orange1.1g018357m.g
Citrus sinensis
orange1.1g018357m.g
I
Eucgr.K01822
Eucalyptus grandis
Eucgr.K01822
I
Thhalv10014032m.g
Eutrema salsugineum
Thhalv10014032m.g
I
GLYMA03G29825
Glycine max
GLYMA03G29825
I
GLYMA19G32715
Glycine max
GLYMA19G32715
I
MLOC_58614
Hordeum vulgare
MLOC_58614
I
LPERR05G14450
Leersia perrieri
LPERR05G14450
I
GSMUA_Achr11G14570_001
Musa acuminata
GSMUA_Achr11G14570_001
I
OBART05G18270
Oryza barthii
OBART05G18270
I
OB05G26080
Oryza brachyantha
OB05G26080
I
ORGLA05G0158500
Oryza glaberrima
ORGLA05G0158500
I
OGLUM05G19350
Oryza glumaepatula
OGLUM05G19350
I
BGIOSGA019942
Oryza indica
BGIOSGA019942
I
OLONG_005656
Oryza longistaminata
OLONG_005656
I
OMERI05G15750
Oryza meridionalis
OMERI05G15750
I
ONIVA05G19180
Oryza nivara
ONIVA05G19180
I
ORUFI05G19430
Oryza rufipogon
ORUFI05G19430
I
OS05G0443900
Oryza sativa
OS05G0443900
I
Pavir.Hb01807
Panicum virgatum
Pavir.Hb01807
I
PDK_20s1405291g002
Phoenix dactylifera
PDK_20s1405291g002
I
PDK_20s1736691g001
Phoenix dactylifera
PDK_20s1736691g001
I
Solyc11g068370.1
Solanum lycopersicum
Solyc11g068370.1
I
Solyc10g080410.1
Solanum lycopersicum
Solyc10g080410.1
I
Solyc10g078670.1
Solanum lycopersicum
Solyc10g078670.1
I
PGSC0003DMG400023678
Solanum tuberosum
PGSC0003DMG400023678
I
PGSC0003DMG400011430
Solanum tuberosum
PGSC0003DMG400011430
I
Traes_6AS_9916DDE4D
Triticum aestivum
Traes_6AS_9916DDE4D
I
Traes_6BS_65CDD608F
Triticum aestivum
Traes_6BS_65CDD608F
I
Traes_6DS_FD90D1145
Triticum aestivum
Traes_6DS_FD90D1145
I
Traes_1DS_0CFC1995D
Triticum aestivum
Traes_1DS_0CFC1995D
I
Traes_1AL_3B659AABA
Triticum aestivum
Traes_1AL_3B659AABA
I
GRMZM2G029979
Zea mays
GRMZM2G029979
I