CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCM_017061
(
Theobroma cacao
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
TCM_017061
T180495_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOY02643
FAR1
138
226
KCYSRYAVLEGFSIRKDFVNKSRVNGAIVSRRYTCYRQGYRPGKHTVNVRKPQQEMRTGCLAHMTIARQPNGKFRVSHFETKHNHEFVN
EOY02643
FAR1
273
362
EFYNTYAGRVGFSVRKDYVNRSKIDGAVASRRFTCFREGFRQKDKRDLNVKRPRKETRIGCLAQLVISRQPDGKYRVTHFEEKHNHELVA
EOY02644
FAR1
138
226
KCYSRYAVLEGFSIRKDFVNKSRVNGAIVSRRYTCYRQGYRPGKHTVNVRKPQQEMRTGCLAHMTIARQPNGKFRVSHFETKHNHEFVN
EOY02644
FAR1
273
362
EFYNTYAGRVGFSVRKDYVNRSKIDGAVASRRFTCFREGFRQKDKRDLNVKRPRKETRIGCLAQLVISRQPDGKYRVTHFEEKHNHELVA
Links
Other
FAR1
family TFs
Other
Theobroma cacao
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK27657.1
Cannabis sativa
PK27657.1
N
0.894
Ciclev10014295m.g
Citrus clementina
Ciclev10014295m.g
N
0.888
GLYMA05G06351
Glycine max
GLYMA05G06351
N
0.832
Gorai.006G037100
Gossypium raimondii
Gorai.006G037100
N
0.866
Pm015569
Prunus mume
Pm015569
N
0.872
29633.m000898
Ricinus communis
29633.m000898
N
0.866