CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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29633.m000898
(
Ricinus communis
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
29633.m000898
T181010_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
29633.m000898
FAR1
113
201
KCYSRYAVLQGFSIRKDFVNKSRLNGDVVSRRYTCYKQGYRPANHIAKVRKPRQETRTGCLAQMTIARQPNGKFRVTRFVTQHNHEFLA
29633.m000898
FAR1
248
337
EFYNAYAGQVGFSVRKDYVNRSKIDGAVASRRFTCFREGFRQKDKRDLNVKRPRKETRIGCTAQLVISRQPDSKYRVTHFEKKHNHELVA
Links
Other
FAR1
family TFs
Other
Ricinus communis
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava12424.valid.m1
Manihot esculenta
cassava12424.valid.m1
N
0.914
TCM_017061
Theobroma cacao
TCM_017061
N
0.866
Ciclev10014295m.g
Citrus clementina
Ciclev10014295m.g
N
0.849
Pm015569
Prunus mume
Pm015569
N
0.844
PK27657.1
Cannabis sativa
PK27657.1
N
0.838
Gorai.006G037100
Gossypium raimondii
Gorai.006G037100
N
0.810
GLYMA05G06351
Glycine max
GLYMA05G06351
N
0.788