CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava12424.valid.m1
(
Manihot esculenta
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
cassava12424.valid.m1
T181026_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava12424.valid.m1
FAR1
1
26
MTIARQPYGKFRVTRFETQHNHEFVT
cassava12424.valid.m1
FAR1
48
137
EFYNAYAGRVGFSVRKDYVNRSKIDGAVASRRFTCFREGFRQKDNRDLNVKRPRKETRIGCMAQLVISRQSDGKYRVTHFEEKHNHELVA
Links
Other
FAR1
family TFs
Other
Manihot esculenta
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29633.m000898
Ricinus communis
29633.m000898
N
0.914
PK27657.1
Cannabis sativa
PK27657.1
N
0.897
Ciclev10014295m.g
Citrus clementina
Ciclev10014295m.g
N
0.888
Gorai.006G037100
Gossypium raimondii
Gorai.006G037100
N
0.879
Pm015569
Prunus mume
Pm015569
N
0.853
GLYMA05G06351
Glycine max
GLYMA05G06351
N
0.828