CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10014295m.g
(
Citrus clementina
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Ciclev10014295m.g
T181293_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10014295m
FAR1
139
227
KCYSRYAVLEGFSIRKDFVNKSRINGVVVSRRYTCYRQGYRPTKHSANLRKPRQETRTGCLAHMTIARQPNGMFQVTHFETKHNHEFVT
Ciclev10014295m
FAR1
274
363
EYYNAYAGRLGFSVRKDYVNRSKIDGAVASRRFTCFREGFRQKDKRDLNVKRSQKETRIGCLAQLVVSRQADGKYRVTHFEEKHNHELVA
Ciclev10014297m
FAR1
139
227
KCYSRYAVLEGFSIRKDFVNKSRINGVVVSRRYTCYRQGYRPTKHSANLRKPRQETRTGCLAHMTIARQPNGMFQVTHFETKHNHEFVT
Ciclev10014297m
FAR1
274
363
EYYNAYAGRLGFSVRKDYVNRSKIDGAVASRRFTCFREGFRQKDKRDLNVKRSQKETRIGCLAQLVVSRQADGKYRVTHFEEKHNHELVA
Links
Other
FAR1
family TFs
Other
Citrus clementina
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_017061
Theobroma cacao
TCM_017061
N
0.888
cassava12424.valid.m1
Manihot esculenta
cassava12424.valid.m1
N
0.888
PK27657.1
Cannabis sativa
PK27657.1
N
0.866
Pm015569
Prunus mume
Pm015569
N
0.855
29633.m000898
Ricinus communis
29633.m000898
N
0.849
Gorai.006G037100
Gossypium raimondii
Gorai.006G037100
N
0.838
GLYMA05G06351
Glycine max
GLYMA05G06351
N
0.810