CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
evm.TU.supercontig_195.42
(
Carica papaya
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
evm.TU.supercontig_195.42
T181379_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_195.42
FAR1
97
185
AFYNAYATQVGFIIRVSKLSRSRRDGSAIGRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMILVRKVSSGKWVVTKFVKEHTHPLTP
Links
Other
FAR1
family TFs
Other
Carica papaya
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASIM_0001177701
Anisakis simplex
ASIM_0001177701
N
ACEP14860
Atta cephalotes
ACEP14860
N
YQE_11979
Dendroctonus ponderosae
YQE_11979
N
EEL_0001074901
Elaeophora elaphi
EEL_0001074901
N
GPLIN_000819200
Globodera pallida
GPLIN_000819200
N
GPUH_0000809301
Gongylonema pulchrum
GPUH_0000809301
N
LOAG_15212
Loa loa
LOAG_15212
N
MhA1_Contig653.frz3.gene3
Meloidogyne hapla
MhA1_Contig653.frz3.gene3
N
OESDEN_08744
Oesophagostomum dentatum
OESDEN_08744
N
SNAPOd2T00028278001
Oikopleura dioica
SNAPOd2T00028278001
N
SNAPOd2T00023082001
Oikopleura dioica
SNAPOd2T00023082001
N
nOo.2.0.1.g06132
Onchocerca ochengi
nOo.2.0.1.g06132
N
Ogr10463
Ophisaurus gracilis
Ogr10463
N
PEQ_0000073901
Parascaris equorum
PEQ_0000073901
N
RPRC011887
Rhodnius prolixus
RPRC011887
N
A_08344
Schistosoma haematobium
A_08344
N
Sjc_0121660
Schistosoma japonicum
Sjc_0121660
N
L898_g7817
Steinernema monticolum
L898_g7817
N
L892_g7302
Steinernema scapterisci
L892_g7302
N
TsM_000155300
Taenia solium
TsM_000155300
N