CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_8.51
(
Carica papaya
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
evm.TU.supercontig_8.51
T181384_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_8.51
FAR1
11
102
EFYIAYGRRIGFTVRIHHNRRSRINNVVIGQDFVCSKEGFREKKYMYRKDRVLPPPPITREGCPAMLRIALRDGAKWVVTKFVKEHNHTLIS
Links
Other
FAR1
family TFs
Other
Carica papaya
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OB0044G10270
Oryza brachyantha
OB0044G10270
N
ORGLA12G0020400
Oryza glaberrima
ORGLA12G0020400
N
OGLUM12G02750
Oryza glumaepatula
OGLUM12G02750
N
BGIOSGA034760
Oryza indica
BGIOSGA034760
N
BGIOSGA036958
Oryza indica
BGIOSGA036958
N
OMERI12G01090
Oryza meridionalis
OMERI12G01090
N
ONIVA11G02640
Oryza nivara
ONIVA11G02640
N
OPUNC12G02190
Oryza punctata
OPUNC12G02190
N
ORUFI11G02370
Oryza rufipogon
ORUFI11G02370
N
OS11G0139600
Oryza sativa
OS11G0139600
N