CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SNOG_09317
(
Phaeosphaeria nodorum
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
SNOG_09317
T188569_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU06173
M01992_2.00
Neurospora crassa
RTAAACAH
DTGTTTAY
PBM
Weirauch et al.(2014)
pTH8896
0.756
0.698
Foxj2
M01980_2.00
Mus musculus
RTAAACAN
NTGTTTAY
PBM
Weirauch et al.(2014)
pTH6638
0.702
0.535
Foxj2
M00790_2.00
Mus musculus
VHMAAYANN
NNTRTTKDB
PBM
Weirauch et al.(2013)
pTH3043
0.697
0.535
FOXJ2
M03016_2.00
Homo sapiens
GTAAACARTMAACA
TGTTKAYTGTTTAC
SELEX
Jolma et al.(2013)
FOXJ2_1
0.697
0.535
FOXJ2
M03017_2.00
Homo sapiens
RTAAACAH
DTGTTTAY
SELEX
Jolma et al.(2013)
FOXJ2_2
0.697
0.535
FOXJ2
M03018_2.00
Homo sapiens
GTAAACAWMAACA
TGTTKWTGTTTAC
SELEX
Jolma et al.(2013)
FOXJ2_3
0.697
0.535
FOXJ2
M04809_2.00
Homo sapiens
NTRTTTACAAYANN
NNTRTTGTAAAYAN
SELEX
Yin et al.(2017)
FOXJ2_eDBD_HT-SELEX
0.697
0.535
FOXJ2
M09084_2.00
Homo sapiens
WARAYAAAYA
TRTTTRTYTW
Misc
Kulakovskiy et al.(2013)
FOXJ2_HUMAN.H11MO.0.C
0.697
0.535
Foxj2
M09100_2.00
Mus musculus
WARAYAAAYA
TRTTTRTYTW
Misc
Kulakovskiy et al.(2013)
FOXJ2_MOUSE.H11MO.0.C
0.697
0.535
FOXJ2
M10527_2.00
Homo sapiens
HHNHMRAYAAAYANHNND
HNNDNTRTTTRTYKDNDD
Transfac
Matys et al.(2006)
V$FOXJ2_01
0.697
0.535
FOXJ2
M10528_2.00
Homo sapiens
VYMAYAATATTTKN
NMAAATATTRTKRB
Transfac
Matys et al.(2006)
V$FOXJ2_02
0.697
0.535
FOXJ2
M04810_2.00
Homo sapiens
NTRTTTACAAYANN
NNTRTTGTAAAYAN
SELEX
Yin et al.(2017)
FOXJ2_eDBD_Methyl-HT-SELEX
0.697
0.535
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SNOT_09317
Forkhead
203
292
KPSYSYAMLIGMAILRAPARRLTLAQIYKWISDTFAFYRNSQETGWQNSIRHNLSLSKSFSKQERPKDDPGKGHYWVINSGFEKQYHKVK
Links
Other
Forkhead
family TFs
Other
Phaeosphaeria nodorum
TFs
216 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nAv.1.0.1.g00430
Acanthocheilonema viteae
nAv.1.0.1.g00430
I
0.000
ANCCAN_20978
Ancylostoma caninum
ANCCAN_20978
I
0.000
ASIM_0001604001
Anisakis simplex
ASIM_0001604001
I
0.000
ASU_13433
Ascaris suum
ASU_13433
I
0.000
Bm3575
Brugia malayi
Bm3575
I
0.000
BTMF_0000404601
Brugia timori
BTMF_0000404601
I
0.000
nDi.2.2.2.g01429
Dirofilaria immitis
nDi.2.2.2.g01429
I
0.000
EEL_0000707501
Elaeophora elaphi
EEL_0000707501
I
0.000
EVEC_0000355201
Enterobius vermicularis
EVEC_0000355201
I
0.000
GPUH_0001329001
Gongylonema pulchrum
GPUH_0001329001
I
0.000
HCOI00676200
Haemonchus contortus
HCOI00676200
I
0.000
HPBE_0001599301
Heligmosomoides bakeri
HPBE_0001599301
I
0.000
LOAG_08923
Loa loa
LOAG_08923
I
0.000
genemark-nMf.1.1.scaf08549-processed-gene-0.3
Meloidogyne floridensis
genemark-nMf.1.1.scaf08549-processed-gene-0.3
N
0.000
MhA1_Contig1148.frz3.fgene1
Meloidogyne hapla
MhA1_Contig1148.frz3.fgene1
N
0.000
Minc15475
Meloidogyne incognita
Minc15475
N
0.000
NECAME_01081
Necator americanus
NECAME_01081
N
0.000
NBR_0001502601
Nippostrongylus brasiliensis
NBR_0001502601
N
0.000
OESDEN_03018
Oesophagostomum dentatum
OESDEN_03018
I
0.000
nOo.2.0.1.g00181
Onchocerca ochengi
nOo.2.0.1.g00181
I
0.000
WBGene00241622
Onchocerca volvulus
WBGene00241622
I
0.000
L898_g17086
Steinernema monticolum
L898_g17086
I
0.000
SVUK_0000938201
Strongylus vulgaris
SVUK_0000938201
I
0.000
TELCIR_19676
Teladorsagia circumcincta
TELCIR_19676
I
0.000
WUBG_02880
Wuchereria bancrofti
WUBG_02880
I
0.000