AMTR_s00008p00092930 (Amborella trichopoda)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 AMTR_s00008p00092930 T191672_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA27
M02005_2.00 		Arabidopsis thaliana
NNGATBNNN
NNNVATCNN		 PBM
Weirauch et al.(2014)
pTH7492 		0.816 0.812
GATA26
M02001_2.00 		Arabidopsis thaliana
NNKATBNNNN
NNNNVATMNN		 PBM
Weirauch et al.(2014)
pTH7490 		0.816 0.781
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERM95284 GATA 109 140

Links

Other GATA family TFs
Other Amborella trichopoda TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK03582.1 Cannabis sativa PK03582.1 N
evm.TU.supercontig_167.13 Carica papaya evm.TU.supercontig_167.13 N
Ciclev10025157m.g Citrus clementina Ciclev10025157m.g N
orange1.1g043090m.g Citrus sinensis orange1.1g043090m.g N
Cucsa.310210 Cucumis sativus Cucsa.310210 N
Eucgr.J03076 Eucalyptus grandis Eucgr.J03076 N
Eucgr.J03074 Eucalyptus grandis Eucgr.J03074 N
gene15716-v1.0-hybrid Fragaria vesca gene15716-v1.0-hybrid N
GLYMA20G02970 Glycine max GLYMA20G02970 N
GLYMA15G00440 Glycine max GLYMA15G00440 N
Gorai.009G127000 Gossypium raimondii Gorai.009G127000 N
Gorai.010G116000 Gossypium raimondii Gorai.010G116000 N
cassava11133.m1 Manihot esculenta cassava11133.m1 N
cassava10866.m1 Manihot esculenta cassava10866.m1 N
mgf009738m Mimulus guttatus mgf009738m N
POPTR_0006s27240 Populus trichocarpa POPTR_0006s27240 N
POPTR_0001s20880 Populus trichocarpa POPTR_0001s20880 N
PRUPE_ppa002486mg Prunus persica PRUPE_ppa002486mg N
29841.m002892 Ricinus communis 29841.m002892 N
SapurV1A.0344s0260 Salix purpurea SapurV1A.0344s0260 N
Solyc06g068200.1 Solanum lycopersicum Solyc06g068200.1 N
TCM_036972 Theobroma cacao TCM_036972 N
TCM_027270 Theobroma cacao TCM_027270 N