CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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M408DRAFT_325890
(
Serendipita vermifera
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
M408DRAFT_325890
T194002_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIM34504
GATA
154
189
CSSCGTTTTPEWRRGPKGLATLCNGCGLVWQKIKKR
Links
Other
GATA
family TFs
Other
Serendipita vermifera
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HpaG801016
Hyaloperonospora arabidopsidis
HpaG801016
I
0.000
HpaG811872
Hyaloperonospora arabidopsidis
HpaG811872
I
0.000
fgenesh1_kg.C_scaffold_1000461
Phytophthora capsici
fgenesh1_kg.C_scaffold_1000461
I
0.000
e_gw1.4.390.1
Phytophthora capsici
e_gw1.4.390.1
I
0.000
PITG_14364
Phytophthora infestans
PITG_14364
I
0.000
PITG_00513
Phytophthora infestans
PITG_00513
I
0.000
fgenesh_scip_prom.46568.10732
Phytophthora kernoviae
fgenesh_scip_prom.46568.10732
I
0.000
fgenesh_scip_prom.46568.5993
Phytophthora kernoviae
fgenesh_scip_prom.46568.5993
I
0.000
fgenesh_scip_prom.28083.3668
Phytophthora lateralis
fgenesh_scip_prom.28083.3668
I
0.000
F443_20633
Phytophthora parasitica
F443_20633
I
0.000
F443_04247
Phytophthora parasitica
F443_04247
I
0.000
Phyra72796
Phytophthora ramorum
Phyra72796
D
0.000
Physo132994
Phytophthora sojae
Physo132994
I
0.000
Physo142552
Phytophthora sojae
Physo142552
I
0.000
maker-pag1_scaffold_4-fgenesh-gene-0.4
Pythium aphanidermatum
maker-pag1_scaffold_4-fgenesh-gene-0.4
I
0.000
maker-par_contig_5774-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_5774-fgenesh-gene-0.0
I
0.000
maker-pir_contig_1401-snap-gene-0.1
Pythium irregulare
maker-pir_contig_1401-snap-gene-0.1
I
0.000
maker-pir_contig_1153-fgenesh-gene-0.2
Pythium irregulare
maker-pir_contig_1153-fgenesh-gene-0.2
I
0.000
maker-piw_contig_2979-fgenesh-gene-0.0
Pythium iwayamai
maker-piw_contig_2979-fgenesh-gene-0.0
I
0.000
PYU1_G004134
Pythium ultimum
PYU1_G004134
I
0.000
maker-pve_contig_695-fgenesh-gene-0.3
Pythium vexans
maker-pve_contig_695-fgenesh-gene-0.3
I
0.000