VIT_05s0077g01450 (Vitis vinifera)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 VIT_05s0077g01450 T195671_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA16
M06897_2.00 		Arabidopsis thaliana
ATGATGATGATSATGATGATGATSATG
CATSATCATCATCATSATCATCATCAT		 Dap-seq
OMalley et al.(2016)
GATA16_col_a 		0.838 0.889
GATA15
M01997_2.00 		Arabidopsis thaliana
NNHGATCNN
NNGATCDNN		 PBM
Weirauch et al.(2014)
pTH7662 		0.818 0.889
GATA15
M06886_2.00 		Arabidopsis thaliana
GATGATGATGATGATGATS
SATCATCATCATCATCATC		 Dap-seq
OMalley et al.(2016)
GATA15_col_b 		0.818 0.889
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_05s0077g01450.t01 GATA 36 71

Links

Other GATA family TFs
Other Vitis vinifera TFs

143 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I
Ciclev10011367m.g Citrus clementina Ciclev10011367m.g N
orange1.1g008153m.g Citrus sinensis orange1.1g008153m.g N
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I
MDP0000669451 Malus domestica MDP0000669451 I
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I
mgf018196m Mimulus guttatus mgf018196m N
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I
28677.m000055 Ricinus communis 28677.m000055 N
SapurV1A.0102s0220 Salix purpurea SapurV1A.0102s0220 N