Gorai.006G214400 (Gossypium raimondii)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Gorai.006G214400 T196595_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA26
M02001_2.00 		Arabidopsis thaliana
NNKATBNNNN
NNNNVATMNN		 PBM
Weirauch et al.(2014)
pTH7490 		0.867 0.972
GATA27
M02005_2.00 		Arabidopsis thaliana
NNGATBNNN
NNNVATCNN		 PBM
Weirauch et al.(2014)
pTH7492 		0.867 0.972
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.006G214400.1 GATA 7 42

Links

Other GATA family TFs
Other Gossypium raimondii TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_014_00370 Aquilegia coerulea Aquca_014_00370 N 0.000
SCL1 Arabidopsis lyrata fgenesh2_kg.1__2335__AT1G21450.1 N 0.000
SCL1 Arabidopsis thaliana AT1G21450 N 0.000
Bo5g034360 Brassica oleracea Bo5g034360 N 0.000
PK29476.1 Cannabis sativa PK29476.1 N 0.000
Ca_03920 Cicer arietinum Ca_03920 N 0.000
Ciclev10000671m.g Citrus clementina Ciclev10000671m.g N 0.000
orange1.1g007853m.g Citrus sinensis orange1.1g007853m.g N 0.000
Eucgr.F04276 Eucalyptus grandis Eucgr.F04276 N 0.000
Thhalv10007142m.g Eutrema salsugineum Thhalv10007142m.g N 0.000
gene01015-v1.0-hybrid Fragaria vesca gene01015-v1.0-hybrid N 0.000
GLYMA06G12701 Glycine max GLYMA06G12701 N 0.000
GLYMA13G09220 Glycine max GLYMA13G09220 N 0.000
GLYMA14G27290 Glycine max GLYMA14G27290 N 0.000
Gorai.005G083700 Gossypium raimondii Gorai.005G083700 N 0.000
Gorai.009G251800 Gossypium raimondii Gorai.009G251800 N 0.000
Lus10042776.g Linum usitatissimum Lus10042776.g N 0.000
Lus10029747.g Linum usitatissimum Lus10029747.g N 0.000
MDP0000727836 Malus domestica MDP0000727836 N 0.000
MDP0000859087 Malus domestica MDP0000859087 N 0.000
cassava26784.m1 Manihot esculenta cassava26784.m1 N 0.000
cassava42388.valid.m1 Manihot esculenta cassava42388.valid.m1 N 0.000
MTR_3g089055 Medicago truncatula MTR_3g089055 N 0.000
MTR_1g029420 Medicago truncatula MTR_1g029420 N 0.000
mgf010500m Mimulus guttatus mgf010500m N 0.000
GSMUA_Achr3G02410_001 Musa acuminata GSMUA_Achr3G02410_001 N 0.000
GSMUA_Achr10G17290_001 Musa acuminata GSMUA_Achr10G17290_001 N 0.000
PDK_20s1392371g003 Phoenix dactylifera PDK_20s1392371g003 N 0.000
POPTR_0005s20890 Populus trichocarpa POPTR_0005s20890 N 0.000
POPTR_0002s07430 Populus trichocarpa POPTR_0002s07430 N 0.000
Pm022704 Prunus mume Pm022704 N 0.000
PRUPE_ppa003310mg Prunus persica PRUPE_ppa003310mg N 0.000
29648.m001919 Ricinus communis 29648.m001919 N 0.000
SapurV1A.0261s0120 Salix purpurea SapurV1A.0261s0120 N 0.000
SapurV1A.0267s0240 Salix purpurea SapurV1A.0267s0240 N 0.000
PGSC0003DMG400024853 Solanum tuberosum PGSC0003DMG400024853 N 0.000
TCM_035362 Theobroma cacao TCM_035362 N 0.000
SCL1 Vitis vinifera VIT_18s0001g15270 N 0.000
VIT_04s0044g01370 Vitis vinifera VIT_04s0044g01370 N 0.000