SAKL0B01826g (Lachancea kluyveri)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 SAKL0B01826g T197228_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GZF3
M00051_2.00 		Saccharomyces cerevisiae
HGATAAGN
NCTTATCD		 PBM
Badis et al.(2008)
GZF3_2167 		0.862 0.771
GZF3
M01548_2.00 		Saccharomyces cerevisiae
NNGATWNN
NNWATCNN		 PBM
Zhu et al.(2009)
Gzf3 		0.862 0.771
GZF3
M07480_2.00 		Saccharomyces cerevisiae
HGATAASN
NSTTATCD		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0309.1 		0.862 0.771
GZF3
M08562_2.00 		Saccharomyces cerevisiae
GATAAG
CTTATC		 Misc
DeBoer et al.(2011)
YJL110C_593 		0.862 0.771
DAL80
M00052_2.00 		Saccharomyces cerevisiae
NNNNTANNNN
NNNNTANNNN		 PBM
Badis et al.(2008)
DAL80_2083 		0.862 0.743
DAL80
M07481_2.00 		Saccharomyces cerevisiae
YGATAAG
CTTATCR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0289.1 		0.862 0.743
DAL80
M08564_2.00 		Saccharomyces cerevisiae
VNMGATAD
HTATCKNB		 Misc
DeBoer et al.(2011)
YKR034W_1355 		0.862 0.743
GAT1
M00049_2.00 		Saccharomyces cerevisiae
NNNNGATANN
NNTATCNNNN		 PBM
Badis et al.(2008)
GAT1_2166 		0.837 0.800
GAT1
M01546_2.00 		Saccharomyces cerevisiae
NNGATWNN
NNWATCNN		 PBM
Zhu et al.(2009)
Gat1 		0.837 0.800
GAT1
M07478_2.00 		Saccharomyces cerevisiae
NHGATAAG
CTTATCDN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0300.1 		0.837 0.800
GAT1
M08560_2.00 		Saccharomyces cerevisiae
WKTGATWW
WWATCAMW		 Misc
DeBoer et al.(2011)
YFL021W_962 		0.837 0.800
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SAKL0B01826g GATA 423 457

Links

Other GATA family TFs
Other Lachancea kluyveri TFs

376 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Thhalv10012893m.g Eutrema salsugineum Thhalv10012893m.g I
GLYMA15G04200 Glycine max GLYMA15G04200 I
GLYMA13G41210 Glycine max GLYMA13G41210 I
Gorai.009G098300 Gossypium raimondii Gorai.009G098300 I
Gorai.006G172000 Gossypium raimondii Gorai.006G172000 I
Gorai.003G130700 Gossypium raimondii Gorai.003G130700 I
Lus10016527.g Linum usitatissimum Lus10016527.g N
Lus10040795.g Linum usitatissimum Lus10040795.g N
MDP0000119092 Malus domestica MDP0000119092 N
MDP0000138764 Malus domestica MDP0000138764 N
MDP0000222004 Malus domestica MDP0000222004 N
OBART02G37370 Oryza barthii OBART02G37370 I
PDK_20s1300944g001 Phoenix dactylifera PDK_20s1300944g001 N
estExt_fgenesh1_pg.C_1140084 Physcomitrella patens estExt_fgenesh1_pg.C_1140084 N
SapurV1A.0040s0420 Salix purpurea SapurV1A.0040s0420 I
SapurV1A.0041s0150 Salix purpurea SapurV1A.0041s0150 I
Si034524m.g Setaria italica Si034524m.g I
PGSC0003DMG400023432 Solanum tuberosum PGSC0003DMG400023432 I
Traes_3DL_FCD561E40 Triticum aestivum Traes_3DL_FCD561E40 N