CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SCL11
(
Arabidopsis thaliana
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
AT5G59450
T199845_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT5G59450.1
GRAS
224
598
LRSLLTQCAQAVASFDQRRATDKLKEIRAHSSSNGDGTQRLAFYFAEALEARITGNISPPVSNPFPSSTTSMVDILKAYKLFVHTCPIYVTDYFAANKSIYELAMKATKLHIVDFGVLYGFQWPCLLRALSKRPGGPPMLRVTGIELPQAGFRPSDRVEETGRRLKRFCDQFNVPFEFNFIAKKWETITLDELMINPGETTVVNCIHRLQYTPDETVSLDSPRDTVLKLFRDINPDLFVFAEINGMYNSPFFMTRFREALFHYSSLFDMFDTTIHAEDEYKNRSLLERELLVRDAMSVISCEGAERFARPETYKQWRVRILRAGFKPATISKQIMKEAKEIVRKRYHRDFVIDSDNNWMLQGWKGRVIYAFSCWK
Links
Other
GRAS
family TFs
Other
Arabidopsis thaliana
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_11057
Ancylostoma caninum
ANCCAN_11057
N
ANCDUO_19178
Ancylostoma duodenale
ANCDUO_19178
N
ANCDUO_16102
Ancylostoma duodenale
ANCDUO_16102
N
Bo1g131210
Brassica oleracea
Bo1g131210
N
Brh_R000011
Buceros rhinoceros
Brh_R000011
I
Carubv10007218m.g
Capsella rubella
Carubv10007218m.g
N
ENSECAG00000002506
Equus caballus
ENSECAG00000002506
I
Eucgr.D00184
Eucalyptus grandis
Eucgr.D00184
I
gene23926-v1.0-hybrid
Fragaria vesca
gene23926-v1.0-hybrid
N
Gfo_R000008
Geospiza fortis
Gfo_R000008
N
ISCW012461
Ixodes scapularis
ISCW012461
N
MDP0000690933
Malus domestica
MDP0000690933
N
cassava13400.valid.m1
Manihot esculenta
cassava13400.valid.m1
N
snap_masked-nMf.1.1.scaf13062-processed-gene-0.2
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf13062-processed-gene-0.2
N
mgf006959m
Mimulus guttatus
mgf006959m
N
GSMUA_Achr3G23090_001
Musa acuminata
GSMUA_Achr3G23090_001
N
Ocbimv22024374m.g
Octopus bimaculoides
Ocbimv22024374m.g
N
OLONG_012459
Oryza longistaminata
OLONG_012459
N
OLONG_008306
Oryza longistaminata
OLONG_008306
N
ORUFI09G21220
Oryza rufipogon
ORUFI09G21220
N
Pavir.Fa02028
Panicum virgatum
Pavir.Fa02028
N
PDK_20s1347391g002
Phoenix dactylifera
PDK_20s1347391g002
N
POPTR_0012s03550
Populus trichocarpa
POPTR_0012s03550
N
SCUD_0000383301
Schistosoma curassoni
SCUD_0000383301
N
PGSC0003DMG400013263
Solanum tuberosum
PGSC0003DMG400013263
N
Traes_1DL_9FB53E48A
Triticum aestivum
Traes_1DL_9FB53E48A
N
M407DRAFT_77617
Tulasnella calospora
M407DRAFT_77617
N
GRMZM2G123140
Zea mays
GRMZM2G123140
I
GRMZM2G004334
Zea mays
GRMZM2G004334
N