CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra035653
(
Brassica rapa
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Bra035653
T200008_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra035653.1-P
GRAS
346
720
LRSLLLSCAQAVSVNDHRRAEGLLRLVRQHSSSYGDGTERLAHYFANSLEARLAGTGTQVYTALSSKKTSAADMLKAYQTYVSVCPFKKIGIVFANHTIQQLVKKTMPDTIHIIDFGISYGFQWHSLVHRLAWRRGSSCKLRITGIDLPQRGFRPANGVIETGHRLAKYCKKFNVPFEYNAIAQKWETIKLEDLKLKEGEFVAVNSLFRFRNLLDETVAVDSPRDVVLRLIQKIKPNIFIPSILSGSYNAPFFVTRFREVLYHFSSLFDMCDTTLTREDPMRVVFEKEFYGREIMNVVACEGTARVERPESYKQWQGRMVRAGFRQLPVEKELVQKLRLMVDKEYKSKEFDVDQDGNWFLQGWKGRLVYASSFWV
Links
Other
GRAS
family TFs
Other
Brassica rapa
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh2_kg.4__2179__AT2G40620.1
Arabidopsis lyrata
fgenesh2_kg.4__2179__AT2G40620.1
I
0.000
BZIP18
Arabidopsis thaliana
AT2G40620
D
0.000
Bostr.9345s0072
Boechera stricta
Bostr.9345s0072
I
0.000
BRADI1G17700
Brachypodium distachyon
BRADI1G17700
I
0.000
Bo4g012700
Brassica oleracea
Bo4g012700
I
0.000
Bra004582
Brassica rapa
Bra004582
I
0.000
Cagra.1642s0027
Capsella grandiflora
Cagra.1642s0027
I
0.000
Carubv10025182m.g
Capsella rubella
Carubv10025182m.g
I
0.000
evm.TU.supercontig_19.62
Carica papaya
evm.TU.supercontig_19.62
I
0.000
Thhalv10016819m.g
Eutrema salsugineum
Thhalv10016819m.g
I
0.000
Gorai.009G293600
Gossypium raimondii
Gorai.009G293600
I
0.000
Gorai.011G209200
Gossypium raimondii
Gorai.011G209200
I
0.000
Lus10012881.g
Linum usitatissimum
Lus10012881.g
I
0.000
Lus10030531.g
Linum usitatissimum
Lus10030531.g
I
0.000
cassava43674.valid.m1
Manihot esculenta
cassava43674.valid.m1
I
0.000
Pavir.Ba00224
Panicum virgatum
Pavir.Ba00224
I
0.000
Pavir.Bb03755
Panicum virgatum
Pavir.Bb03755
I
0.000
29729.m002363
Ricinus communis
29729.m002363
I
0.000
Si030224m.g
Setaria italica
Si030224m.g
I
0.000
Sb02g042990
Sorghum bicolor
Sb02g042990
I
0.000
TCM_045524
Theobroma cacao
TCM_045524
I
0.000