CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
VIT_02s0154g00400
(
Vitis vinifera
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
VIT_02s0154g00400
T201814_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_02s0154g00400.t01
GRAS
148
511
LLDQLCKAAELVGTGNFSIAQGILARLNHQLSPEGKPFQRAAFYFKEALQLILMNNNPAASPPLRSPTPFDVIFKMGAYKVFSDVSPLIQFANFTCNQALLEALDDADRIHIIDFDIGFGAQWASFMQELPVRNRGAPSLKITALASPSTTHHPLELKLLRENLTLFADEIGIAFELQVVNFDSFDPVSYSMPYFRTSENEAIVVNFPIWSSSNHPAALPLLLRFIKQLSPKLMVSLDRGCDRGDLPLQQHLLHGIQSYTNLLESLDATNAMTDTVSKIERFLFQPRIESTTLGRLRSPDKMPPWKTLFASAGFTPVSFSNFTESQADCVVKRTLVRGFHVEKRQALLILCWQNRELISASAWR
Links
Other
GRAS
family TFs
Other
Vitis vinifera
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK22905.1
Cannabis sativa
PK22905.1
N
0.742
evm.TU.supercontig_29.139
Carica papaya
evm.TU.supercontig_29.139
N
0.737
Cla005738
Citrullus lanatus
Cla005738
N
0.765
Ciclev10018916m.g
Citrus clementina
Ciclev10018916m.g
N
0.733
Cucsa.320850
Cucumis sativus
Cucsa.320850
N
0.760
gene31749-v1.0-hybrid
Fragaria vesca
gene31749-v1.0-hybrid
N
0.725
Gorai.008G238300
Gossypium raimondii
Gorai.008G238300
N
0.725
Lus10004353.g
Linum usitatissimum
Lus10004353.g
N
0.756
Lus10028934.g
Linum usitatissimum
Lus10028934.g
N
0.743
MDP0000275704
Malus domestica
MDP0000275704
N
0.743
cassava30062.valid.m1
Manihot esculenta
cassava30062.valid.m1
N
0.769
POPTR_0001s00480
Populus trichocarpa
POPTR_0001s00480
N
0.758
POPTR_0003s11020
Populus trichocarpa
POPTR_0003s11020
N
0.745
Pm023512
Prunus mume
Pm023512
N
0.758
PRUPE_ppa001561mg
Prunus persica
PRUPE_ppa001561mg
N
0.758
29916.m000544
Ricinus communis
29916.m000544
N
0.750
SapurV1A.0324s0040
Salix purpurea
SapurV1A.0324s0040
N
0.726
SapurV1A.0325s0140
Salix purpurea
SapurV1A.0325s0140
N
0.717
TCM_015991
Theobroma cacao
TCM_015991
N
0.728