CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10027940m.g
(
Citrus clementina
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Ciclev10027940m.g
T202414_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10027940m
GRAS
311
681
LPGLLTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTPMHTHISCRTSAADILKAYQMSLSAWPFIRMSYLFANQTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLNLIKRINPDVFIHGISNGTYNAPFFLARFREALFHFSAMFDIFDATVPREDAERMLFEREIVGKDALNAIACEGIERVERPETYKQWQARNQRAGFRQLPLDQELVKKVRTKAESNYHQDFVVDVDGHWMLQGWKGRVMFALSVWK
Links
Other
GRAS
family TFs
Other
Citrus clementina
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
evm.TU.supercontig_81.122
Carica papaya
evm.TU.supercontig_81.122
N
0.705
Ciclev10027926m.g
Citrus clementina
Ciclev10027926m.g
N
0.705
orange1.1g045051m.g
Citrus sinensis
orange1.1g045051m.g
N
0.707
orange1.1g045079m.g
Citrus sinensis
orange1.1g045079m.g
N
0.993
Gorai.003G130400
Gossypium raimondii
Gorai.003G130400
N
0.705
cassava34369.m1
Manihot esculenta
cassava34369.m1
N
0.721
Traes_5AL_9AE0ED26A
Triticum aestivum
Traes_5AL_9AE0ED26A
N
0.730