CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.003G130400
(
Gossypium raimondii
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Gorai.003G130400
T202611_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.003G130400.1
GRAS
264
635
LWSLLTQCAQAVAINDQRTANELLKQISQNSSTTGDGTQRFANYFADALTTRLAGMGAPSYSPLVSNRTSAADILKAYRVLVLACPFKKMMHFYANKKIMKVAEKATTLHIVDFGICYGFQWPCLIQRLSARAGGPPKLRITGIEFPQPGFRPAERVEETGRRLKRYCERFKVPFEYNVIAKKWETIQLEELKIKKDEVVIVNCMYRLKNLPDDTLSSTSARDIVLKLIRSINPEFFIHGISNGTYNAPFFVTRFREALFHFSAIFDIFEANVPRDDPQRMMFEREILGRDIMNVVACEGIERVERPETYKQWQARTLRAGFKQIPLDQELVKKVTNMVQSNYHRDFIIDVDGRWMLQGWKGRVIFALSCWK
Gorai.003G130400.2
GRAS
237
608
LWSLLTQCAQAVAINDQRTANELLKQISQNSSTTGDGTQRFANYFADALTTRLAGMGAPSYSPLVSNRTSAADILKAYRVLVLACPFKKMMHFYANKKIMKVAEKATTLHIVDFGICYGFQWPCLIQRLSARAGGPPKLRITGIEFPQPGFRPAERVEETGRRLKRYCERFKVPFEYNVIAKKWETIQLEELKIKKDEVVIVNCMYRLKNLPDDTLSSTSARDIVLKLIRSINPEFFIHGISNGTYNAPFFVTRFREALFHFSAIFDIFEANVPRDDPQRMMFEREILGRDIMNVVACEGIERVERPETYKQWQARTLRAGFKQIPLDQELVKKVTNMVQSNYHRDFIIDVDGRWMLQGWKGRVIFALSCWK
Links
Other
GRAS
family TFs
Other
Gossypium raimondii
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACYPI001198
Acyrthosiphon pisum
ACYPI001198
I
0.000
AAEL003978
Aedes aegypti
AAEL003978
I
0.000
AALB005349
Anopheles albimanus
AALB005349
I
0.000
AATE004981
Anopheles atroparvus
AATE004981
I
0.000
ADAC007927
Anopheles darlingi
ADAC007927
I
0.000
GB42492
Apis mellifera
GB42492
I
0.000
ACEP27778
Atta cephalotes
ACEP27778
I
0.000
e_gw.6.95.1
Branchiostoma floridae
e_gw.6.95.1
I
0.000
CapteG19364
Capitella teleta
CapteG19364
I
0.000
CapteG223614
Capitella teleta
CapteG223614
I
0.000
CGI_10005451
Crassostrea gigas
CGI_10005451
I
0.000
CpipJ_CPIJ005455
Culex pipiens
CpipJ_CPIJ005455
I
0.000
CPIJ005455
Culex quinquefasciatus
CPIJ005455
I
0.000
DAPPUDRAFT_53927
Daphnia pulex
DAPPUDRAFT_53927
I
0.000
YQE_07798
Dendroctonus ponderosae
YQE_07798
I
0.000
GF25038
Drosophila ananassae
FBgn0102030
I
0.000
GG14656
Drosophila erecta
FBgn0106912
I
0.000
GH15211
Drosophila grimshawi
FBgn0122686
I
0.000
Kah
Drosophila melanogaster
FBgn0035144
D
0.000
GI16731
Drosophila mojavensis
FBgn0139479
I
0.000
GA14370
Drosophila pseudoobscura
FBgn0074398
I
0.000
GM14272
Drosophila sechellia
FBgn0169198
I
0.000
GJ12475
Drosophila virilis
FBgn0199717
I
0.000
GK17557
Drosophila willistoni
FBgn0219556
I
0.000
GE21016
Drosophila yakuba
FBgn0238298
I
0.000
HelroG68814
Helobdella robusta
HelroG68814
N
0.000
LDEC013204
Leptinotarsa decemlineata
LDEC013204
I
0.000
LCUP006416
Lucilia cuprina
LCUP006416
I
0.000
LLOJ001905
Lutzomyia longipalpis
LLOJ001905
I
0.000
MDOA000347
Musca domestica
MDOA000347
I
0.000
NV16451
Nasonia vitripennis
NV16451
I
0.000
Ocbimv22026834m.g
Octopus bimaculoides
Ocbimv22026834m.g
I
0.000
PHUM530390
Pediculus humanus
PHUM530390
I
0.000
SINV14822
Solenopsis invicta
SINV14822
I
0.000
SPU_015640
Strongylocentrotus purpuratus
SPU_015640
I
0.000
tetur14g01820
Tetranychus urticae
tetur14g01820
I
0.000
TC002803
Tribolium castaneum
TC002803
I
0.000
L798_08219
Zootermopsis nevadensis
L798_08219
I
0.000