CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.003G130500
(
Gossypium raimondii
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Gorai.003G130500
T202612_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.003G130500.1
GRAS
383
758
LRTLLILCAQAVSADDRRTASELLKQIKEHSSPLGDANQRLAYIFADGLEARLDGSGALIHVFYASLASKMTTAADILKAYKAYLCSCPFTKLAILFANKSIYHMAEKASVLHIVDFGILYGFQWPILIQHLSTRPGGPPKLRITGIEIPQRGFRPAERIEETGRRLAKYCERFNVPFEYNPIAVEHWETIQIEDIKIDSNEMLAVNSLFRFHNLLDETADVDCPRNAMLKLIRKMKPDIFVHSIVNGAYNAPFFVTRFKEVLFHISAVFDVFENTLPREEPARLMFEREFYGREAMNVIACEGSARVQRPETYKQWQIRTLREGFKPLPLDQELMKIIRDKLKAWYHKDFVIDEDNHWMLQGWKGRILYGSSCWV
Links
Other
GRAS
family TFs
Other
Gossypium raimondii
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG010969.1
Alligator sinensis
Alligator_sinensis_CCG010969.1
N
0.000
ENSAPLG00000013593
Anas platyrhynchos
ENSAPLG00000013593
N
0.000
PRDM1
Anolis carolinensis
ENSACAG00000005496
N
0.000
Afo_R003683
Aptenodytes forsteri
Afo_R003683
N
0.000
ENSBTAP00000001081-D1
Bos grunniens
ENSBTAP00000001081-D1
N
0.000
PRDM1
Bos taurus
ENSBTAG00000000816
N
0.000
estExt_fgenesh2_pg.C_440063
Branchiostoma floridae
estExt_fgenesh2_pg.C_440063
N
0.000
estExt_fgenesh2_pg.C_440053
Branchiostoma floridae
estExt_fgenesh2_pg.C_440053
N
0.000
prdm1a
Danio rerio
ENSDARG00000002445
N
0.000
GL12308
Drosophila persimilis
FBgn0149915
N
0.000
EEL_0000388201
Elaeophora elaphi
EEL_0000388201
N
0.000
ENSFALG00000011624
Ficedula albicollis
ENSFALG00000011624
N
0.000
ENSGMOG00000009730
Gadus morhua
ENSGMOG00000009730
N
0.000
ENSGMOG00000010670
Gadus morhua
ENSGMOG00000010670
N
0.000
ENSGALG00000015388
Gallus gallus
ENSGALG00000015388
N
0.000
prdm1a
Gasterosteus aculeatus
ENSGACG00000001740
N
0.000
ENSGACG00000009358
Gasterosteus aculeatus
ENSGACG00000009358
N
0.000
Gfo_R012197
Geospiza fortis
Gfo_R012197
N
0.000
ENSLOCG00000016531
Lepisosteus oculatus
ENSLOCG00000016531
N
0.000
PRDM1
Meleagris gallopavo
ENSMGAG00000013524
N
0.000
ENSMPUG00000015726
Mustela putorius furo
ENSMPUG00000015726
N
0.000
Ogr18550
Ophisaurus gracilis
Ogr18550
N
0.000
ENSONIG00000006687
Oreochromis niloticus
ENSONIG00000006687
N
0.000
ENSOARG00000004628
Ovis aries
ENSOARG00000004628
N
0.000
ENSOARG00000011272
Ovis aries
ENSOARG00000011272
N
0.000
Pvit_09291
Pogona vitticeps
Pvit_09291
N
0.000
PRDM1
Taeniopygia guttata
ENSTGUG00000012204
N
0.000
ENSTRUG00000007847
Takifugu rubripes
ENSTRUG00000007847
N
0.000
prdm1
Takifugu rubripes
ENSTRUG00000000404
N
0.000
prdm1.S
Xenopus laevis
XB-GENE-853257
N
0.000
XP_002937203
Xenopus tropicalis
XP_002937203
N
0.000