estExt_fgenesh2_pg.C_440053 (Branchiostoma floridae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 estExt_fgenesh2_pg.C_440053 T138711_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_pg.C_440053 C2H2 ZF 485 507
estExt_fgenesh2_pg.C_440053 C2H2 ZF 513 535
estExt_fgenesh2_pg.C_440053 C2H2 ZF 541 563
estExt_fgenesh2_pg.C_440053 C2H2 ZF 569 591

Links

Other C2H2 ZF family TFs
Other Branchiostoma floridae TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
estExt_fgenesh2_pg.C_440063 Branchiostoma floridae estExt_fgenesh2_pg.C_440063 N 0.827
ENSAPLG00000013593 Anas platyrhynchos ENSAPLG00000013593 N 0.809
ENSFALG00000011624 Ficedula albicollis ENSFALG00000011624 N 0.809
ENSGALG00000015388 Gallus gallus ENSGALG00000015388 N 0.809
ENSGMOG00000009730 Gadus morhua ENSGMOG00000009730 N 0.809
ENSLOCG00000016531 Lepisosteus oculatus ENSLOCG00000016531 N 0.809
PRDM1 Meleagris gallopavo ENSMGAG00000013524 N 0.809
PRDM1 Taeniopygia guttata ENSTGUG00000012204 N 0.809
Afo_R003683 Aptenodytes forsteri Afo_R003683 N 0.809
XP_002937203 Xenopus tropicalis XP_002937203 N 0.809
PRDM1 Anolis carolinensis ENSACAG00000005496 N 0.807
ENSGACG00000009358 Gasterosteus aculeatus ENSGACG00000009358 N 0.807
Ogr18550 Ophisaurus gracilis Ogr18550 N 0.807
Pvit_09291 Pogona vitticeps Pvit_09291 N 0.807
PRDM1 Bos taurus ENSBTAG00000000816 N 0.806
prdm1a Danio rerio ENSDARG00000002445 N 0.806
ENSOARG00000011272 Ovis aries ENSOARG00000011272 N 0.806
ENSBTAP00000001081-D1 Bos grunniens ENSBTAP00000001081-D1 N 0.806
prdm1.S Xenopus laevis XB-GENE-853257 N 0.806
Gfo_R012197 Geospiza fortis Gfo_R012197 N 0.800
prdm1a Gasterosteus aculeatus ENSGACG00000001740 N 0.797
ENSONIG00000006687 Oreochromis niloticus ENSONIG00000006687 N 0.797
prdm1a Oryzias latipes ENSORLG00000015684 N 0.797
prdm1 Takifugu rubripes ENSTRUG00000000404 N 0.797
ENSGMOG00000010670 Gadus morhua ENSGMOG00000010670 N 0.780
ENSTRUG00000007847 Takifugu rubripes ENSTRUG00000007847 N 0.780
Alligator_sinensis_CCG010969.1 Alligator sinensis Alligator_sinensis_CCG010969.1 N 0.773
GL12308 Drosophila persimilis FBgn0149915 N 0.772
ENSOARG00000004628 Ovis aries ENSOARG00000004628 N 0.768
ZNF683 Dasypus novemcinctus ENSDNOG00000043822 N 0.761
ZNF683 Procavia capensis ENSPCAG00000010624 N 0.761
OESDEN_02230 Oesophagostomum dentatum OESDEN_02230 N 0.757
ENSMPUG00000015726 Mustela putorius furo ENSMPUG00000015726 N 0.756