Alligator_sinensis_CCG010969.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG010969.1 T133272_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG010969.1 C2H2 ZF 411 433
Alligator_sinensis_CCG010969.1 C2H2 ZF 439 461
Alligator_sinensis_CCG010969.1 C2H2 ZF 467 489
Alligator_sinensis_CCG010969.1 C2H2 ZF 495 517

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSTRUG00000007847 Takifugu rubripes ENSTRUG00000007847 N 0.779
prdm1.S Xenopus laevis XB-GENE-853257 N 0.779
ZNF683 Dasypus novemcinctus ENSDNOG00000043822 N 0.777
PRDM1 Anolis carolinensis ENSACAG00000005496 N 0.776
ENSAPLG00000013593 Anas platyrhynchos ENSAPLG00000013593 N 0.776
ENSFALG00000011624 Ficedula albicollis ENSFALG00000011624 N 0.776
ENSGACG00000009358 Gasterosteus aculeatus ENSGACG00000009358 N 0.776
ENSGALG00000015388 Gallus gallus ENSGALG00000015388 N 0.776
ENSGMOG00000009730 Gadus morhua ENSGMOG00000009730 N 0.776
ENSLOCG00000016531 Lepisosteus oculatus ENSLOCG00000016531 N 0.776
PRDM1 Meleagris gallopavo ENSMGAG00000013524 N 0.776
PRDM1 Taeniopygia guttata ENSTGUG00000012204 N 0.776
Afo_R003683 Aptenodytes forsteri Afo_R003683 N 0.776
Ogr18550 Ophisaurus gracilis Ogr18550 N 0.776
Pvit_09291 Pogona vitticeps Pvit_09291 N 0.776
XP_002937203 Xenopus tropicalis XP_002937203 N 0.776
PRDM1 Bos taurus ENSBTAG00000000816 N 0.773
prdm1a Danio rerio ENSDARG00000002445 N 0.773
ENSOARG00000011272 Ovis aries ENSOARG00000011272 N 0.773
ENSBTAP00000001081-D1 Bos grunniens ENSBTAP00000001081-D1 N 0.773
estExt_fgenesh2_pg.C_440053 Branchiostoma floridae estExt_fgenesh2_pg.C_440053 N 0.773
estExt_fgenesh2_pg.C_440063 Branchiostoma floridae estExt_fgenesh2_pg.C_440063 N 0.773
ENSOARG00000004628 Ovis aries ENSOARG00000004628 N 0.767
Gfo_R012197 Geospiza fortis Gfo_R012197 N 0.767
prdm1a Gasterosteus aculeatus ENSGACG00000001740 N 0.764
ENSONIG00000006687 Oreochromis niloticus ENSONIG00000006687 N 0.764
prdm1a Oryzias latipes ENSORLG00000015684 N 0.764
prdm1 Takifugu rubripes ENSTRUG00000000404 N 0.764
ENSGMOG00000010670 Gadus morhua ENSGMOG00000010670 N 0.761
Myotis_brandtii_ZNF683_10029662 Myotis brandtii Myotis_brandtii_ZNF683_10029662 N 0.758
ENSMPUG00000015726 Mustela putorius furo ENSMPUG00000015726 N 0.757