prdm1a (Oryzias latipes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSORLG00000015684 T104947_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000019640 C2H2 ZF 343 365
ENSORLP00000019640 C2H2 ZF 371 393
ENSORLP00000019640 C2H2 ZF 399 421
ENSORLP00000019640 C2H2 ZF 427 449

Links

Other C2H2 ZF family TFs
Other Oryzias latipes TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
prdm1a Gasterosteus aculeatus ENSGACG00000001740 N 0.827
ENSONIG00000006687 Oreochromis niloticus ENSONIG00000006687 N 0.827
prdm1 Takifugu rubripes ENSTRUG00000000404 N 0.827
ENSAPLG00000013593 Anas platyrhynchos ENSAPLG00000013593 N 0.815
ENSFALG00000011624 Ficedula albicollis ENSFALG00000011624 N 0.815
ENSGALG00000015388 Gallus gallus ENSGALG00000015388 N 0.815
ENSGMOG00000009730 Gadus morhua ENSGMOG00000009730 N 0.815
ENSLOCG00000016531 Lepisosteus oculatus ENSLOCG00000016531 N 0.815
PRDM1 Meleagris gallopavo ENSMGAG00000013524 N 0.815
PRDM1 Taeniopygia guttata ENSTGUG00000012204 N 0.815
Afo_R003683 Aptenodytes forsteri Afo_R003683 N 0.815
XP_002937203 Xenopus tropicalis XP_002937203 N 0.815
PRDM1 Anolis carolinensis ENSACAG00000005496 N 0.813
ENSGACG00000009358 Gasterosteus aculeatus ENSGACG00000009358 N 0.813
Ogr18550 Ophisaurus gracilis Ogr18550 N 0.813
Pvit_09291 Pogona vitticeps Pvit_09291 N 0.813
PRDM1 Bos taurus ENSBTAG00000000816 N 0.812
prdm1a Danio rerio ENSDARG00000002445 N 0.812
ENSOARG00000011272 Ovis aries ENSOARG00000011272 N 0.812
ENSBTAP00000001081-D1 Bos grunniens ENSBTAP00000001081-D1 N 0.812
prdm1.S Xenopus laevis XB-GENE-853257 N 0.812
Gfo_R012197 Geospiza fortis Gfo_R012197 N 0.805
estExt_fgenesh2_pg.C_440053 Branchiostoma floridae estExt_fgenesh2_pg.C_440053 N 0.797
estExt_fgenesh2_pg.C_440063 Branchiostoma floridae estExt_fgenesh2_pg.C_440063 N 0.797
ENSTRUG00000007847 Takifugu rubripes ENSTRUG00000007847 N 0.786
GL12308 Drosophila persimilis FBgn0149915 N 0.784
ENSGMOG00000010670 Gadus morhua ENSGMOG00000010670 N 0.771
EEL_0000388201 Elaeophora elaphi EEL_0000388201 N 0.767
Alligator_sinensis_CCG010969.1 Alligator sinensis Alligator_sinensis_CCG010969.1 N 0.764
ENSMPUG00000015726 Mustela putorius furo ENSMPUG00000015726 N 0.756
ENSOARG00000004628 Ovis aries ENSOARG00000004628 N 0.756