CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.007G376400
(
Gossypium raimondii
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Gorai.007G376400
T202642_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.007G376400.1
GRAS
260
632
LRTLLITCAQAVAAGDRNGTSSELLKQIRQHSSPFGDGNQRLAHYLAEALEARLAGTGSHIYKSLVSKRTSAYDIMKAYLLYVAACPFRKVSHFICNKSINVASRKSMRLHVIDFGILYGFQWPTLIERLSLRPEGPPKLRITGIDFPQPGFKPAERVEETGRRLAAYAEEFKVPFQYKAIAKKWETVRLEELEIEEDEFVVVNCLYRAKNLLDETVAVHSPRNIVLNLIRKINPNLFIHGIINGAFNAPFFVTRFREALFHFSSMFDMLDAIVPREDWERMLIEREILGREALNAIACESWERVERPETVKQWHARILRAGFLQQPFQREIVKEAFERVQTFYHKDFVVDEDKLWLVQGWKGRIIYALSAWK
Links
Other
GRAS
family TFs
Other
Gossypium raimondii
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK20526.1
Cannabis sativa
PK20526.1
N
0.708
Ca_21138
Cicer arietinum
Ca_21138
N
0.735
Cla018179
Citrullus lanatus
Cla018179
N
0.727
Ciclev10011141m.g
Citrus clementina
Ciclev10011141m.g
N
0.749
orange1.1g004514m.g
Citrus sinensis
orange1.1g004514m.g
N
0.749
Cucsa.175500
Cucumis sativus
Cucsa.175500
N
0.730
Eucgr.A01279
Eucalyptus grandis
Eucgr.A01279
N
0.741
GLYMA07G15950
Glycine max
GLYMA07G15950
N
0.759
GLYMA18G39920
Glycine max
GLYMA18G39920
N
0.762
GLYMA03G10320
Glycine max
GLYMA03G10320
N
0.743
Lus10024384.g
Linum usitatissimum
Lus10024384.g
N
0.738
cassava2361.valid.m1
Manihot esculenta
cassava2361.valid.m1
N
0.724
MTR_7g062120
Medicago truncatula
MTR_7g062120
N
0.732
mgf011165m
Mimulus guttatus
mgf011165m
N
0.724
POPTR_0006s08690
Populus trichocarpa
POPTR_0006s08690
N
0.765
Pm002685
Prunus mume
Pm002685
N
0.735
PRUPE_ppa001883mg
Prunus persica
PRUPE_ppa001883mg
N
0.732
29767.m000200
Ricinus communis
29767.m000200
N
0.737
SapurV1A.0001s1700
Salix purpurea
SapurV1A.0001s1700
N
0.789
PGSC0003DMG400019200
Solanum tuberosum
PGSC0003DMG400019200
N
0.705
PGSC0003DMG400008904
Solanum tuberosum
PGSC0003DMG400008904
N
0.700
TCM_021920
Theobroma cacao
TCM_021920
N
0.865
VIT_08s0007g00510
Vitis vinifera
VIT_08s0007g00510
N
0.743