CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ha00317
(
Panicum virgatum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pavir.Ha00317
T203001_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ha00317.1.p
GRAS
428
801
LRTMLIHCAQSVATGDRRSAMELLRQIKQHSSPRGDATQRMAHCFAEGLEARLAGTGSQVYQSLMAKHTSVVEFLKAYKLFTAASSLKKVHIIFANQTILSAVAGRSKLHIVVYGLQYGLQWPGLLHFLSCREGGPPEVRFTGIDLPQPGFRPAYQIEETGRRLSNCALEFGVPFKFQAIAAKWETVCAEDLNIDPDEVLVVYSECDFSKLMDESVDVDTPSPRDMVLNNIRKMRPNVFILFVMNGTYGAPFFLTRFREALFFYSALFDMLDATIPRDNDERLLIERDIFGRSALNVIACEGADRAERPETYKQWQVRNHRAGLKQLPLNPEVVKIARDKVKNYYHKDFLIDEDHRWLLQGWKGRVLYAMSTWV
Links
Other
GRAS
family TFs
Other
Panicum virgatum
TFs
45 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000018305
Ailuropoda melanoleuca
ENSAMEG00000018305
I
0.000
Alligator_sinensis_CCG009660.1
Alligator sinensis
Alligator_sinensis_CCG009660.1
I
0.000
ENSP00000405932-D1
Bos grunniens
ENSP00000405932-D1
I
0.000
PROX2
Bos taurus
ENSBTAG00000015052
I
0.000
PROX2
Callithrix jacchus
ENSCJAG00000020548
I
0.000
PROX2
Canis familiaris
ENSCAFG00000016985
I
0.000
PROX2
Cavia porcellus
ENSCPOG00000009322
I
0.000
Cmyd_10014540
Chelonia mydas
Cmyd_10014540
I
0.000
ENSCSAG00000012283
Chlorocebus sabaeus
ENSCSAG00000012283
I
0.000
PROX2
Choloepus hoffmanni
ENSCHOG00000000477
I
0.000
prox2
Danio rerio
ENSDARG00000041952
I
0.000
PROX2
Dasypus novemcinctus
ENSDNOG00000005528
I
0.000
ENSETEG00000003900
Echinops telfairi
ENSETEG00000003900
N
0.000
ENSECAG00000023529
Equus caballus
ENSECAG00000023529
I
0.000
PROX2
Felis catus
ENSFCAG00000028658
I
0.000
ENSFALG00000006312
Ficedula albicollis
ENSFALG00000006312
I
0.000
ENSGALG00000023113
Gallus gallus
ENSGALG00000023113
N
0.000
PROX2
Gorilla gorilla
ENSGGOG00000022893
I
0.000
PROX2
Homo sapiens
ENSG00000119608
I
0.000
ENSSTOG00000023253
Ictidomys tridecemlineatus
ENSSTOG00000023253
I
0.000
ENSLACG00000018909
Latimeria chalumnae
ENSLACG00000018909
I
0.000
ENSLOCG00000010701
Lepisosteus oculatus
ENSLOCG00000010701
I
0.000
PROX2
Loxodonta africana
ENSLAFG00000012545
I
0.000
ENSMMUP00000005693
Macaca fascicularis
ENSMMUP00000005693
N
0.000
ENSMEUG00000002316
Macropus eugenii
ENSMEUG00000002316
I
0.000
PROX2
Meleagris gallopavo
ENSMGAG00000012715
N
0.000
ENSMICG00000006078
Microcebus murinus
ENSMICG00000006078
I
0.000
ENSMODG00000006137
Monodelphis domestica
ENSMODG00000006137
I
0.000
ENSMPUG00000009289
Mustela putorius furo
ENSMPUG00000009289
I
0.000
Prox2
Mus musculus
ENSMUSG00000042320
I
0.000
Myotis_brandtii_PROX2_10012935
Myotis brandtii
Myotis_brandtii_PROX2_10012935
I
0.000
PROX2
Myotis lucifugus
ENSMLUG00000005898
I
0.000
ENSNLEG00000016325
Nomascus leucogenys
ENSNLEG00000016325
I
0.000
PROX2
Ochotona princeps
ENSOPRG00000011820
I
0.000
Ogr08018
Ophisaurus gracilis
Ogr08018
N
0.000
ENSONIG00000020193
Oreochromis niloticus
ENSONIG00000020193
I
0.000
PROX2
Oryctolagus cuniculus
ENSOCUG00000021246
I
0.000
PROX2
Otolemur garnettii
ENSOGAG00000001327
I
0.000
ENSOARG00000001473
Ovis aries
ENSOARG00000001473
I
0.000
PROX2
Pan troglodytes
ENSPTRG00000006542
I
0.000
ENSPANG00000024084
Papio anubis
ENSPANG00000024084
I
0.000
ENSPSIG00000017015
Pelodiscus sinensis
ENSPSIG00000017015
I
0.000
Pvit_01205
Pogona vitticeps
Pvit_01205
I
0.000
ENSPPYG00000005992
Pongo abelii
ENSPPYG00000005992
I
0.000
PROX2
Pteropus vampyrus
ENSPVAG00000000659
I
0.000
Prox2
Rattus norvegicus
ENSRNOG00000005054
I
0.000
ENSSHAG00000018304
Sarcophilus harrisii
ENSSHAG00000018304
I
0.000
PROX2
Sus scrofa
ENSSSCG00000002373
I
0.000
ENSTGUG00000012170
Taeniopygia guttata
ENSTGUG00000012170
I
0.000
PROX2
Tursiops truncatus
ENSTTRG00000001912
I
0.000
PROX2
Vicugna pacos
ENSVPAG00000003072
I
0.000