CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0040s0480
(
Salix purpurea
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
SapurV1A.0040s0480
T203113_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0040s0480.1.p
GRAS
422
797
LRTLLILCAQAISTDDSRNANELLKQIRQHSSPLGDGTQRLAHFFANGLEARLFGSGNGAPNYFSSLTSKRTTAADMLKAYKTQLQACPFKKLSIAFAIKMILHAAEKATTLHIVDFGVLYGFQWPSLIQQLSLLPNGPPKLRLTGIELPQHGFRPSERIEETGRRLANYCERFKVPFEYNPITAQNWEKIPIEDLKINRNEVLAVNCLFRFKNLLDETVEVDCPKDAVLKLIRKMNPDIFVHAIVNGSYNAPFFLTRFREALFHFSSLFDILDSTLPREDQERMMFEREFFGQDAMNVIACEGQGRVERPETYKQWQVRTLRAGFKPLPFDQELMTKFKGKLKSCYHKDFVIDEDNNWMLQGWKGRIIFASSCWV
Links
Other
GRAS
family TFs
Other
Salix purpurea
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK06453.1
Cannabis sativa
PK06453.1
I
0.000
HpaG810857
Hyaloperonospora arabidopsidis
HpaG810857
I
0.000
fgenesh1_kg.C_scaffold_15000102
Phytophthora capsici
fgenesh1_kg.C_scaffold_15000102
I
0.000
estExt_Genewise1Plus.C_2050016
Phytophthora capsici
estExt_Genewise1Plus.C_2050016
I
0.000
estExt_Genewise1Plus.C_180162
Phytophthora capsici
estExt_Genewise1Plus.C_180162
I
0.000
estExt_fgenesh1_kg.C_3051400005
Phytophthora capsici
estExt_fgenesh1_kg.C_3051400005
I
0.000
estExt_fgenesh1_kg.C_2050026
Phytophthora capsici
estExt_fgenesh1_kg.C_2050026
I
0.000
PITG_18789
Phytophthora infestans
PITG_18789
I
0.000
PITG_14400
Phytophthora infestans
PITG_14400
I
0.000
fgenesh_scip_prom.46568.8840
Phytophthora kernoviae
fgenesh_scip_prom.46568.8840
I
0.000
fgenesh_scip_prom.28083.1909
Phytophthora lateralis
fgenesh_scip_prom.28083.1909
I
0.000
fgenesh_scip_prom.28083.5526
Phytophthora lateralis
fgenesh_scip_prom.28083.5526
I
0.000
F443_19686
Phytophthora parasitica
F443_19686
I
0.000
F443_08983
Phytophthora parasitica
F443_08983
I
0.000
F443_20671
Phytophthora parasitica
F443_20671
I
0.000
F443_20702
Phytophthora parasitica
F443_20702
I
0.000
F443_20703
Phytophthora parasitica
F443_20703
I
0.000
Phyra95260
Phytophthora ramorum
Phyra95260
I
0.000
Phyra87784
Phytophthora ramorum
Phyra87784
I
0.000
Phyra80938
Phytophthora ramorum
Phyra80938
D
0.000
Physo132946
Phytophthora sojae
Physo132946
I
0.000
Physo132945
Phytophthora sojae
Physo132945
I
0.000
Physo132943
Phytophthora sojae
Physo132943
I
0.000
maker-pag1_scaffold_151-fgenesh-gene-0.1
Pythium aphanidermatum
maker-pag1_scaffold_151-fgenesh-gene-0.1
I
0.000
maker-pag1_scaffold_266-snap-gene-0.11
Pythium aphanidermatum
maker-pag1_scaffold_266-snap-gene-0.11
I
0.000
maker-par_contig_2748-snap-gene-0.2
Pythium arrhenomanes
maker-par_contig_2748-snap-gene-0.2
I
0.000
maker-par_contig_1566-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_1566-fgenesh-gene-0.0
I
0.000
maker-par_contig_1627-fgenesh-gene-0.1
Pythium arrhenomanes
maker-par_contig_1627-fgenesh-gene-0.1
I
0.000
maker-par_contig_1627-snap-gene-0.2
Pythium arrhenomanes
maker-par_contig_1627-snap-gene-0.2
I
0.000
maker-pir_contig_548-fgenesh-gene-0.3
Pythium irregulare
maker-pir_contig_548-fgenesh-gene-0.3
I
0.000
maker-pir_contig_548-fgenesh-gene-0.4
Pythium irregulare
maker-pir_contig_548-fgenesh-gene-0.4
I
0.000
maker-pir_contig_516-fgenesh-gene-0.2
Pythium irregulare
maker-pir_contig_516-fgenesh-gene-0.2
I
0.000
maker-pir_contig_435-fgenesh-gene-0.7
Pythium irregulare
maker-pir_contig_435-fgenesh-gene-0.7
I
0.000
maker-pir_contig_435-fgenesh-gene-0.6
Pythium irregulare
maker-pir_contig_435-fgenesh-gene-0.6
I
0.000
maker-pir_contig_548-snap-gene-0.6
Pythium irregulare
maker-pir_contig_548-snap-gene-0.6
I
0.000
maker-piw_contig_637-fgenesh-gene-0.5
Pythium iwayamai
maker-piw_contig_637-fgenesh-gene-0.5
I
0.000
maker-piw_contig_50-fgenesh-gene-0.1
Pythium iwayamai
maker-piw_contig_50-fgenesh-gene-0.1
I
0.000
PYU1_G002833
Pythium ultimum
PYU1_G002833
I
0.000
PYU1_G002835
Pythium ultimum
PYU1_G002835
I
0.000
PYU1_G002849
Pythium ultimum
PYU1_G002849
I
0.000
maker-pve_contig_734-snap-gene-0.9
Pythium vexans
maker-pve_contig_734-snap-gene-0.9
I
0.000
maker-pve_contig_13-snap-gene-0.46
Pythium vexans
maker-pve_contig_13-snap-gene-0.46
I
0.000
maker-pve_contig_1017-fgenesh-gene-0.2
Pythium vexans
maker-pve_contig_1017-fgenesh-gene-0.2
I
0.000