CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Rhox10
(
Rattus norvegicus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSRNOG00000040026
T215475_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000058257
Homeodomain
93
149
QIKHHKFTYAQLCELEKAFQETQYPDAHRRKALAALIHVDECKVKAWFKNKRAKYRK
Links
Other
Homeodomain
family TFs
Other
Rattus norvegicus
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_42450
Aegilops tauschii
F775_42450
I
F775_01070
Aegilops tauschii
F775_01070
I
AMTR_s00022p00165560
Amborella trichopoda
AMTR_s00022p00165560
I
GIS2
Arabidopsis lyrata
fgenesh2_kg.6__609__AT5G06650.1
I
ZFP5
Arabidopsis thaliana
AT1G10480
D
GIS2
Arabidopsis thaliana
AT5G06650
I
Bostr.2902s0137
Boechera stricta
Bostr.2902s0137
I
Bostr.13671s0437
Boechera stricta
Bostr.13671s0437
I
Bostr.13129s0308
Boechera stricta
Bostr.13129s0308
I
BRADI4G30920
Brachypodium distachyon
BRADI4G30920
I
BRADI4G37760
Brachypodium distachyon
BRADI4G37760
I
Bo9g011450
Brassica oleracea
Bo9g011450
I
Bo2g007320
Brassica oleracea
Bo2g007320
I
Bo9g166240
Brassica oleracea
Bo9g166240
I
Bo8g109510
Brassica oleracea
Bo8g109510
I
Bra028724
Brassica rapa
Bra028724
I
Bra008787
Brassica rapa
Bra008787
I
PK10012.1
Cannabis sativa
PK10012.1
I
Cagra.1504s0017
Capsella grandiflora
Cagra.1504s0017
I
Cagra.3166s0007
Capsella grandiflora
Cagra.3166s0007
I
Carubv10002570m.g
Capsella rubella
Carubv10002570m.g
I
Carubv10003685m.g
Capsella rubella
Carubv10003685m.g
I
Carubv10003820m.g
Capsella rubella
Carubv10003820m.g
I
Carubv10018785m.g
Capsella rubella
Carubv10018785m.g
I
evm.TU.supercontig_116.88
Carica papaya
evm.TU.supercontig_116.88
I
evm.TU.supercontig_1307.1
Carica papaya
evm.TU.supercontig_1307.1
I
evm.TU.supercontig_51.84
Carica papaya
evm.TU.supercontig_51.84
I
Ca_23376
Cicer arietinum
Ca_23376
N
Ca_08116
Cicer arietinum
Ca_08116
I
Ciclev10003844m.g
Citrus clementina
Ciclev10003844m.g
I
orange1.1g046965m.g
Citrus sinensis
orange1.1g046965m.g
I
Thhalv10008773m.g
Eutrema salsugineum
Thhalv10008773m.g
I
Thhalv10015891m.g
Eutrema salsugineum
Thhalv10015891m.g
I
gene05169-v1.0-hybrid
Fragaria vesca
gene05169-v1.0-hybrid
I
gene05263-v1.0-hybrid
Fragaria vesca
gene05263-v1.0-hybrid
I
GLYMA19G40220
Glycine max
GLYMA19G40220
I
GLYMA06G14783
Glycine max
GLYMA06G14783
I
GLYMA03G37610
Glycine max
GLYMA03G37610
I
MLOC_4507
Hordeum vulgare
MLOC_4507
I
LPERR09G07930
Leersia perrieri
LPERR09G07930
I
LPERR08G07840
Leersia perrieri
LPERR08G07840
I
Lus10017229.g
Linum usitatissimum
Lus10017229.g
I
chr5.LjT04G07.90.nd
Lotus japonicus
chr5.LjT04G07.90.nd
I
MDP0000165710
Malus domestica
MDP0000165710
I
MDP0000121370
Malus domestica
MDP0000121370
I
cassava45710.m1
Manihot esculenta
cassava45710.m1
I
cassava44297.m1
Manihot esculenta
cassava44297.m1
I
MTR_2g067740
Medicago truncatula
MTR_2g067740
N
OBART09G11250
Oryza barthii
OBART09G11250
I
OB09G17800
Oryza brachyantha
OB09G17800
I
ORGLA09G0084000
Oryza glaberrima
ORGLA09G0084000
I
OGLUM09G11630
Oryza glumaepatula
OGLUM09G11630
I
BGIOSGA029710
Oryza indica
BGIOSGA029710
I
OLONG_006424
Oryza longistaminata
OLONG_006424
I
OMERI09G08780
Oryza meridionalis
OMERI09G08780
I
ONIVA09G10990
Oryza nivara
ONIVA09G10990
I
OPUNC09G09720
Oryza punctata
OPUNC09G09720
I
ORUFI09G12050
Oryza rufipogon
ORUFI09G12050
I
OS09G0431900
Oryza sativa
OS09G0431900
I
Pavir.Ib01877
Panicum virgatum
Pavir.Ib01877
I
Pavir.Ib01803
Panicum virgatum
Pavir.Ib01803
I
Pavir.Ib01788
Panicum virgatum
Pavir.Ib01788
I
Pavir.Ia03263
Panicum virgatum
Pavir.Ia03263
I
Pavir.Ia03096
Panicum virgatum
Pavir.Ia03096
I
Pavir.Ha01090
Panicum virgatum
Pavir.Ha01090
I
Pavir.Bb02239
Panicum virgatum
Pavir.Bb02239
I
Pm008291
Prunus mume
Pm008291
I
30045.m000471
Ricinus communis
30045.m000471
I
SELMODRAFT_405785
Selaginella moellendorffii
SELMODRAFT_405785
I
SELMODRAFT_450839
Selaginella moellendorffii
SELMODRAFT_450839
I
SELMODRAFT_450813
Selaginella moellendorffii
SELMODRAFT_450813
I
SELMODRAFT_450832
Selaginella moellendorffii
SELMODRAFT_450832
I
Si037914m.g
Setaria italica
Si037914m.g
I
Si031489m.g
Setaria italica
Si031489m.g
I
Si028367m.g
Setaria italica
Si028367m.g
I
Solyc10g078990.1
Solanum lycopersicum
Solyc10g078990.1
I
Solyc10g078970.1
Solanum lycopersicum
Solyc10g078970.1
I
PGSC0003DMG400011450
Solanum tuberosum
PGSC0003DMG400011450
I
Sb02g025390
Sorghum bicolor
Sb02g025390
I
Sb01g034110
Sorghum bicolor
Sb01g034110
I
TCM_044725
Theobroma cacao
TCM_044725
I
Traes_5DL_B97546DA11
Triticum aestivum
Traes_5DL_B97546DA11
I
Traes_5AL_81EFE5211
Triticum aestivum
Traes_5AL_81EFE5211
I
Traes_5BL_3E6B0CD61
Triticum aestivum
Traes_5BL_3E6B0CD61
I
Traes_5DL_DD8A0F6BE
Triticum aestivum
Traes_5DL_DD8A0F6BE
I
TRIUR3_22340
Triticum urartu
TRIUR3_22340
I
TRIUR3_34498
Triticum urartu
TRIUR3_34498
I
VIT_08s0040g00750
Vitis vinifera
VIT_08s0040g00750
I
GRMZM2G161255
Zea mays
GRMZM2G161255
I
GRMZM2G403590
Zea mays
GRMZM2G403590
I
GRMZM2G703281
Zea mays
GRMZM2G703281
I
GRMZM2G115388
Zea mays
GRMZM2G115388
I
GRMZM2G108818
Zea mays
GRMZM2G108818
I
GRMZM2G037574
Zea mays
GRMZM2G037574
I