SELMODRAFT_451015 (Selaginella moellendorffii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 SELMODRAFT_451015 T223119_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WOX13
M02049_2.00 		Arabidopsis thaliana
YTGATTGA
TCAATCAR		 PBM
Weirauch et al.(2014)
pTH6461 		0.603 0.439
WOX13
M00866_2.00 		Arabidopsis thaliana
NNTGATTGAN
NTCAATCANN		 PBM
Franco-Zorrilla et al.(2014)
WOX13 		0.603 0.439
GRMZM2G038252
M02137_2.00 		Zea mays
HTRATTGV
BCAATYAD		 PBM
Weirauch et al.(2014)
pTH6141 		0.603 0.421
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ21095 Homeodomain 35 95

Links

Other Homeodomain family TFs
Other Selaginella moellendorffii TFs

81 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_11947 Aegilops tauschii F775_11947 I 0.599
F775_11596 Aegilops tauschii F775_11596 I 0.603
AMTR_s00044p00155390 Amborella trichopoda AMTR_s00044p00155390 I 0.605
HB-4 Arabidopsis lyrata scaffold_700564.1 I 0.603
WOX13 Arabidopsis thaliana AT4G35550 D 0.603
Bostr.7867s1413 Boechera stricta Bostr.7867s1413 I 0.603
BRADI2G53390 Brachypodium distachyon BRADI2G53390 I 0.603
BRADI3G18800 Brachypodium distachyon BRADI3G18800 I 0.599
Bo1g006370 Brassica oleracea Bo1g006370 I 0.603
Bra011623 Brassica rapa Bra011623 I 0.603
PK07880.1 Cannabis sativa PK07880.1 I 0.603
Cagra.2350s0096 Capsella grandiflora Cagra.2350s0096 I 0.603
Carubv10005217m.g Capsella rubella Carubv10005217m.g I 0.603
evm.TU.supercontig_6.368 Carica papaya evm.TU.supercontig_6.368 I 0.603
Ciclev10002354m.g Citrus clementina Ciclev10002354m.g I 0.602
Ciclev10026199m.g Citrus clementina Ciclev10026199m.g I 0.603
orange1.1g026809m.g Citrus sinensis orange1.1g026809m.g I 0.602
orange1.1g022516m.g Citrus sinensis orange1.1g022516m.g I 0.603
Thhalv10025989m.g Eutrema salsugineum Thhalv10025989m.g I 0.605
gene13035-v1.0-hybrid Fragaria vesca gene13035-v1.0-hybrid I 0.603
Gorai.001G199200 Gossypium raimondii Gorai.001G199200 I 0.603
Gorai.003G002200 Gossypium raimondii Gorai.003G002200 I 0.600
Gorai.004G038300 Gossypium raimondii Gorai.004G038300 I 0.609
MLOC_56124 Hordeum vulgare MLOC_56124 I 0.603
LPERR01G30370 Leersia perrieri LPERR01G30370 I 0.603
chr1.CM0113.620.nc Lotus japonicus chr1.CM0113.620.nc I 0.601
MDP0000304650 Malus domestica MDP0000304650 I 0.603
MDP0000316517 Malus domestica MDP0000316517 I 0.603
cassava23423.valid.m1 Manihot esculenta cassava23423.valid.m1 I 0.603
GSMUA_Achr5G11080_001 Musa acuminata GSMUA_Achr5G11080_001 I 0.601
GSMUA_AchrUn_randomG18610_001 Musa acuminata GSMUA_AchrUn_randomG18610_001 I 0.603
GSMUA_Achr1G17980_001 Musa acuminata GSMUA_Achr1G17980_001 I 0.603
OBART01G35170 Oryza barthii OBART01G35170 I 0.603
OB01G44030 Oryza brachyantha OB01G44030 I 0.603
ORGLA08G0063600 Oryza glaberrima ORGLA08G0063600 I 0.599
ORGLA01G0290300 Oryza glaberrima ORGLA01G0290300 I 0.603
OGLUM08G08120 Oryza glumaepatula OGLUM08G08120 I 0.599
WOX10 Oryza indica BGIOSGA027391 I 0.599
BGIOSGA004695 Oryza indica BGIOSGA004695 I 0.603
OLONG_016784 Oryza longistaminata OLONG_016784 I 0.603
OMERI01G32310 Oryza meridionalis OMERI01G32310 I 0.603
ONIVA01G40180 Oryza nivara ONIVA01G40180 I 0.603
ONIVA08G08030 Oryza nivara ONIVA08G08030 I 0.599
OPUNC01G34140 Oryza punctata OPUNC01G34140 I 0.603
ORUFI01G38500 Oryza rufipogon ORUFI01G38500 I 0.603
ORUFI08G08400 Oryza rufipogon ORUFI08G08400 I 0.599
WOX8 Oryza sativa OS01G0818400 I 0.603
WOX10 Oryza sativa OS08G0242400 I 0.599
Pavir.J33010 Panicum virgatum Pavir.J33010 I 0.599
Pavir.Fb01029 Panicum virgatum Pavir.Fb01029 I 0.599
Pavir.Eb03552 Panicum virgatum Pavir.Eb03552 I 0.603
Pavir.Ea03245 Panicum virgatum Pavir.Ea03245 I 0.603
gw1.224.39.1 Physcomitrella patens gw1.224.39.1 I 0.603
gw1.29.10.1 Physcomitrella patens gw1.29.10.1 I 0.603
HB-4 Populus trichocarpa POPTR_0005s10480 I 0.603
Pm026793 Prunus mume Pm026793 I 0.603
PRUPE_ppa021400mg Prunus persica PRUPE_ppa021400mg I 0.603
29830.m001452 Ricinus communis 29830.m001452 I 0.603
SapurV1A.1240s0080 Salix purpurea SapurV1A.1240s0080 I 0.603
SELMODRAFT_417553 Selaginella moellendorffii SELMODRAFT_417553 I 0.757
SELMODRAFT_419270 Selaginella moellendorffii SELMODRAFT_419270 I 0.759
SELMODRAFT_84885 Selaginella moellendorffii SELMODRAFT_84885 I 0.607
Si002508m.g Setaria italica Si002508m.g I 0.603
Si015065m.g Setaria italica Si015065m.g I 0.599
Sb07g007600 Sorghum bicolor Sb07g007600 I 0.599
Sb03g038080 Sorghum bicolor Sb03g038080 I 0.603
TCM_000062 Theobroma cacao TCM_000062 I 0.603
TCM_034409 Theobroma cacao TCM_034409 I 0.606
Traes_3DS_97BBFFA03 Triticum aestivum Traes_3DS_97BBFFA03 I 0.603
Traes_3DL_6B1815F7D Triticum aestivum Traes_3DL_6B1815F7D I 0.603
TRAES3BF091200100CFD_g Triticum aestivum TRAES3BF091200100CFD_g I 0.603
TRAES3BF091200090CFD_g Triticum aestivum TRAES3BF091200090CFD_g I 0.603
TRAES3BF057600060CFD_g Triticum aestivum TRAES3BF057600060CFD_g I 0.603
Traes_3AL_D0053C177 Triticum aestivum Traes_3AL_D0053C177 I 0.603
TRIUR3_23636 Triticum urartu TRIUR3_23636 I 0.603
VIT_04s0044g00150 Vitis vinifera VIT_04s0044g00150 I 0.603
GRMZM2G314064 Zea mays GRMZM2G314064 I 0.599
GRMZM2G170958 Zea mays GRMZM2G170958 I 0.599
GRMZM2G069274 Zea mays GRMZM2G069274 I 0.603
GRMZM2G038252 Zea mays GRMZM2G038252 D 0.603
GRMZM5G805026 Zea mays GRMZM5G805026 I 0.603