SELMODRAFT_419270 (Selaginella moellendorffii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 SELMODRAFT_419270 T223102_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WOX13
M02049_2.00 		Arabidopsis thaliana
YTGATTGA
TCAATCAR		 PBM
Weirauch et al.(2014)
pTH6461 		0.612 0.421
WOX13
M00866_2.00 		Arabidopsis thaliana
NNTGATTGAN
NTCAATCANN		 PBM
Franco-Zorrilla et al.(2014)
WOX13 		0.612 0.421
GRMZM2G038252
M02137_2.00 		Zea mays
HTRATTGV
BCAATYAD		 PBM
Weirauch et al.(2014)
pTH6141 		0.612 0.421
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ19509 Homeodomain 62 122

Links

Other Homeodomain family TFs
Other Selaginella moellendorffii TFs

179 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SELMODRAFT_417553 Selaginella moellendorffii SELMODRAFT_417553 I 0.865
SELMODRAFT_451015 Selaginella moellendorffii SELMODRAFT_451015 I 0.759
SELMODRAFT_84885 Selaginella moellendorffii SELMODRAFT_84885 I 0.661
gene20491-v1.0-hybrid Fragaria vesca gene20491-v1.0-hybrid I 0.648
SELMODRAFT_451353 Selaginella moellendorffii SELMODRAFT_451353 I 0.646
WOX10 Oryza indica BGIOSGA027391 I 0.631
BRADI3G18800 Brachypodium distachyon BRADI3G18800 I 0.631
F775_11947 Aegilops tauschii F775_11947 I 0.631
GRMZM2G170958 Zea mays GRMZM2G170958 I 0.631
GRMZM2G314064 Zea mays GRMZM2G314064 I 0.631
OGLUM08G08120 Oryza glumaepatula OGLUM08G08120 I 0.631
ONIVA08G08030 Oryza nivara ONIVA08G08030 I 0.631
ORGLA08G0063600 Oryza glaberrima ORGLA08G0063600 I 0.631
ORUFI08G08400 Oryza rufipogon ORUFI08G08400 I 0.631
WOX10 Oryza sativa OS08G0242400 I 0.631
Sb07g007600 Sorghum bicolor Sb07g007600 I 0.631
Si015065m.g Setaria italica Si015065m.g I 0.631
Pavir.Fb01029 Panicum virgatum Pavir.Fb01029 I 0.631
Pavir.J33010 Panicum virgatum Pavir.J33010 I 0.631
1300010135 Ostreococcus tauri 1300010135 N 0.625
TCM_034409 Theobroma cacao TCM_034409 I 0.624
mgf017527m Mimulus guttatus mgf017527m I 0.621
Gorai.004G038300 Gossypium raimondii Gorai.004G038300 I 0.621
Bo11772s010 Brassica oleracea Bo11772s010 I 0.619
Bra023638 Brassica rapa Bra023638 I 0.619
GSMUA_AchrUn_randomG18610_001 Musa acuminata GSMUA_AchrUn_randomG18610_001 I 0.616
Ciclev10002354m.g Citrus clementina Ciclev10002354m.g I 0.615
orange1.1g026809m.g Citrus sinensis orange1.1g026809m.g I 0.615
AMTR_s00044p00155390 Amborella trichopoda AMTR_s00044p00155390 I 0.614
Gorai.003G002200 Gossypium raimondii Gorai.003G002200 I 0.614
Thhalv10025989m.g Eutrema salsugineum Thhalv10025989m.g I 0.614
chr1.CM0113.620.nc Lotus japonicus chr1.CM0113.620.nc I 0.613
WOX13 Arabidopsis thaliana AT4G35550 D 0.612
BGIOSGA004695 Oryza indica BGIOSGA004695 I 0.612
Bo1g006370 Brassica oleracea Bo1g006370 I 0.612
Bra011623 Brassica rapa Bra011623 I 0.612
BRADI2G53390 Brachypodium distachyon BRADI2G53390 I 0.612
F775_11596 Aegilops tauschii F775_11596 I 0.612
GLYMA04G01830 Glycine max GLYMA04G01830 I 0.612
GLYMA06G01940 Glycine max GLYMA06G01940 I 0.612
GRMZM2G038252 Zea mays GRMZM2G038252 D 0.612
GRMZM2G069274 Zea mays GRMZM2G069274 I 0.612
GRMZM5G805026 Zea mays GRMZM5G805026 I 0.612
GSMUA_Achr1G17980_001 Musa acuminata GSMUA_Achr1G17980_001 I 0.612
GSMUA_Achr5G11080_001 Musa acuminata GSMUA_Achr5G11080_001 I 0.612
LPERR01G30370 Leersia perrieri LPERR01G30370 I 0.612
MLOC_56124 Hordeum vulgare MLOC_56124 I 0.612
OB01G44030 Oryza brachyantha OB01G44030 I 0.612
OBART01G35170 Oryza barthii OBART01G35170 I 0.612
OLONG_016784 Oryza longistaminata OLONG_016784 I 0.612
OMERI01G32310 Oryza meridionalis OMERI01G32310 I 0.612
ONIVA01G40180 Oryza nivara ONIVA01G40180 I 0.612
OPUNC01G34140 Oryza punctata OPUNC01G34140 I 0.612
ORGLA01G0290300 Oryza glaberrima ORGLA01G0290300 I 0.612
ORUFI01G38500 Oryza rufipogon ORUFI01G38500 I 0.612
WOX8 Oryza sativa OS01G0818400 I 0.612
HB-4 Populus trichocarpa POPTR_0005s10480 I 0.612
PRUPE_ppa011225mg Prunus persica PRUPE_ppa011225mg I 0.612
PRUPE_ppa021400mg Prunus persica PRUPE_ppa021400mg I 0.612
Sb03g038080 Sorghum bicolor Sb03g038080 I 0.612
HB-4 Arabidopsis lyrata scaffold_700564.1 I 0.612
Si002508m.g Setaria italica Si002508m.g I 0.612
TCM_000062 Theobroma cacao TCM_000062 I 0.612
Traes_3AL_D0053C177 Triticum aestivum Traes_3AL_D0053C177 I 0.612
TRAES3BF057600060CFD_g Triticum aestivum TRAES3BF057600060CFD_g I 0.612
TRAES3BF091200090CFD_g Triticum aestivum TRAES3BF091200090CFD_g I 0.612
TRAES3BF091200100CFD_g Triticum aestivum TRAES3BF091200100CFD_g I 0.612
Traes_3DL_6B1815F7D Triticum aestivum Traes_3DL_6B1815F7D I 0.612
Traes_3DS_97BBFFA03 Triticum aestivum Traes_3DS_97BBFFA03 I 0.612
TRIUR3_23636 Triticum urartu TRIUR3_23636 I 0.612
VIT_04s0044g00150 Vitis vinifera VIT_04s0044g00150 I 0.612
Cla023819 Citrullus lanatus Cla023819 I 0.612
Pm022951 Prunus mume Pm022951 I 0.612
Pm026793 Prunus mume Pm026793 I 0.612
29830.m001452 Ricinus communis 29830.m001452 I 0.612
cassava23423.valid.m1 Manihot esculenta cassava23423.valid.m1 I 0.612
Cucsa.272210 Cucumis sativus Cucsa.272210 I 0.612
gw1.224.39.1 Physcomitrella patens gw1.224.39.1 I 0.612
gw1.29.10.1 Physcomitrella patens gw1.29.10.1 I 0.612
Bostr.7867s1413 Boechera stricta Bostr.7867s1413 I 0.612
Cagra.2350s0096 Capsella grandiflora Cagra.2350s0096 I 0.612
Carubv10005217m.g Capsella rubella Carubv10005217m.g I 0.612
Ciclev10026199m.g Citrus clementina Ciclev10026199m.g I 0.612
Eucgr.I02222 Eucalyptus grandis Eucgr.I02222 I 0.612
evm.TU.supercontig_6.368 Carica papaya evm.TU.supercontig_6.368 I 0.612
gene13035-v1.0-hybrid Fragaria vesca gene13035-v1.0-hybrid I 0.612
Gorai.001G199200 Gossypium raimondii Gorai.001G199200 I 0.612
MDP0000304650 Malus domestica MDP0000304650 I 0.612
MDP0000316517 Malus domestica MDP0000316517 I 0.612
orange1.1g022516m.g Citrus sinensis orange1.1g022516m.g I 0.612
Pavir.Ea03245 Panicum virgatum Pavir.Ea03245 I 0.612
Pavir.Eb03552 Panicum virgatum Pavir.Eb03552 I 0.612
SapurV1A.1240s0080 Salix purpurea SapurV1A.1240s0080 I 0.612
PK07880.1 Cannabis sativa PK07880.1 I 0.612
OB08G17020 Oryza brachyantha OB08G17020 I 0.609
PDK_20s1408301g001 Phoenix dactylifera PDK_20s1408301g001 I 0.607
OSTLU_27102 Ostreococcus lucimarinus OSTLU_27102 N 0.605
Bo9g070070 Brassica oleracea Bo9g070070 I 0.603
Bra017448 Brassica rapa Bra017448 I 0.603
Thhalv10009654m.g Eutrema salsugineum Thhalv10009654m.g I 0.603
Thhalv10009917m.g Eutrema salsugineum Thhalv10009917m.g I 0.602
chr5.CM0180.70.nc Lotus japonicus chr5.CM0180.70.nc I 0.602
BRADI1G17420 Brachypodium distachyon BRADI1G17420 I 0.601
GSMUA_Achr10G05090_001 Musa acuminata GSMUA_Achr10G05090_001 I 0.601
Lus10016026.g Linum usitatissimum Lus10016026.g I 0.601
AMTR_s00119p00100440 Amborella trichopoda AMTR_s00119p00100440 I 0.600
WOX6 Oryza indica BGIOSGA010824 I 0.600
BGIOSGA026413 Oryza indica BGIOSGA026413 I 0.600
F775_22811 Aegilops tauschii F775_22811 I 0.600
GLYMA03G01000 Glycine max GLYMA03G01000 I 0.600
GLYMA19G29660 Glycine max GLYMA19G29660 I 0.600
GRMZM2G162481 Zea mays GRMZM2G162481 I 0.600
GSMUA_Achr10G12820_001 Musa acuminata GSMUA_Achr10G12820_001 I 0.600
GSMUA_Achr3G09460_001 Musa acuminata GSMUA_Achr3G09460_001 I 0.600
GSMUA_Achr5G27730_001 Musa acuminata GSMUA_Achr5G27730_001 I 0.600
GSMUA_Achr6G15910_001 Musa acuminata GSMUA_Achr6G15910_001 I 0.600
GSMUA_Achr8G01590_001 Musa acuminata GSMUA_Achr8G01590_001 I 0.600
GSMUA_Achr9G05010_001 Musa acuminata GSMUA_Achr9G05010_001 I 0.600
LPERR03G13850 Leersia perrieri LPERR03G13850 I 0.600
LPERR07G23470 Leersia perrieri LPERR07G23470 I 0.600
LPERR07G23520 Leersia perrieri LPERR07G23520 I 0.600
MLOC_65745 Hordeum vulgare MLOC_65745 I 0.600
MLOC_6669 Hordeum vulgare MLOC_6669 I 0.600
MTR_6g027390 Medicago truncatula MTR_6g027390 I 0.600
MTR_7g086940 Medicago truncatula MTR_7g086940 I 0.600
OBART03G15820 Oryza barthii OBART03G15820 I 0.600
OBART07G26670 Oryza barthii OBART07G26670 I 0.600
OGLUM03G15990 Oryza glumaepatula OGLUM03G15990 I 0.600
OGLUM07G26700 Oryza glumaepatula OGLUM07G26700 I 0.600
OMERI07G23310 Oryza meridionalis OMERI07G23310 I 0.600
ONIVA07G26430 Oryza nivara ONIVA07G26430 I 0.600
OPUNC03G15320 Oryza punctata OPUNC03G15320 I 0.600
OPUNC07G25100 Oryza punctata OPUNC07G25100 I 0.600
ORGLA03G0151500 Oryza glaberrima ORGLA03G0151500 I 0.600
ORGLA07G0211000 Oryza glaberrima ORGLA07G0211000 I 0.600
ORUFI03G16410 Oryza rufipogon ORUFI03G16410 I 0.600
ORUFI07G27650 Oryza rufipogon ORUFI07G27650 I 0.600
OS03G0325600 Oryza sativa OS03G0325600 I 0.600
WOX11 Oryza sativa OS07G0684900 I 0.600
POPTR_0013s06310 Populus trichocarpa POPTR_0013s06310 I 0.600
POPTR_0019s05730 Populus trichocarpa POPTR_0019s05730 I 0.600
PRUPE_ppa026303mg Prunus persica PRUPE_ppa026303mg I 0.600
Sb01g036670 Sorghum bicolor Sb01g036670 I 0.600
Sb02g043300 Sorghum bicolor Sb02g043300 I 0.600
Si030836m.g Setaria italica Si030836m.g I 0.600
Si039112m.g Setaria italica Si039112m.g I 0.600
TCM_025805 Theobroma cacao TCM_025805 I 0.600
Traes_2BS_8A1FE01EE Triticum aestivum Traes_2BS_8A1FE01EE I 0.600
Traes_2DS_B5227B5F6 Triticum aestivum Traes_2DS_B5227B5F6 I 0.600
TRAES3BF079200050CFD_g Triticum aestivum TRAES3BF079200050CFD_g I 0.600
Traes_4AS_EC04D9E8A Triticum aestivum Traes_4AS_EC04D9E8A I 0.600
Traes_4DL_5E79CC79C Triticum aestivum Traes_4DL_5E79CC79C I 0.600
TRIUR3_34808 Triticum urartu TRIUR3_34808 I 0.600
TRIUR3_34876 Triticum urartu TRIUR3_34876 I 0.600
VIT_08s0056g01200 Vitis vinifera VIT_08s0056g01200 I 0.600
Ca_08180 Cicer arietinum Ca_08180 I 0.600
Ca_19701 Cicer arietinum Ca_19701 I 0.600
30072.m000927 Ricinus communis 30072.m000927 I 0.600
cassava15562.m1 Manihot esculenta cassava15562.m1 I 0.600
cassava4770.m1 Manihot esculenta cassava4770.m1 I 0.600
Cucsa.336980 Cucumis sativus Cucsa.336980 I 0.600
mgf016673m Mimulus guttatus mgf016673m I 0.600
Aquca_014_00949 Aquilegia coerulea Aquca_014_00949 I 0.600
Ciclev10021682m.g Citrus clementina Ciclev10021682m.g I 0.600
Eucgr.A02149 Eucalyptus grandis Eucgr.A02149 I 0.600
evm.TU.supercontig_73.3 Carica papaya evm.TU.supercontig_73.3 I 0.600
gene30337-v1.0-hybrid Fragaria vesca gene30337-v1.0-hybrid I 0.600
Gorai.007G346300 Gossypium raimondii Gorai.007G346300 I 0.600
Gorai.013G196400 Gossypium raimondii Gorai.013G196400 I 0.600
MDP0000136426 Malus domestica MDP0000136426 I 0.600
MDP0000524885 Malus domestica MDP0000524885 I 0.600
orange1.1g047211m.g Citrus sinensis orange1.1g047211m.g I 0.600
Pavir.Ba00249 Panicum virgatum Pavir.Ba00249 I 0.600
Pavir.Ia03448 Panicum virgatum Pavir.Ia03448 I 0.600
Pavir.J23422 Panicum virgatum Pavir.J23422 I 0.600
SapurV1A.0631s0110 Salix purpurea SapurV1A.0631s0110 I 0.600
SapurV1A.1660s0010 Salix purpurea SapurV1A.1660s0010 I 0.600
LjSGA_037808.1 Lotus japonicus LjSGA_037808.1 I 0.600
LjT26C04.20.nd Lotus japonicus LjT26C04.20.nd I 0.600