Traes_4BS_1DACC49DE (Triticum aestivum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Traes_4BS_1DACC49DE T224208_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KNAT7
M01064_2.00 		Arabidopsis thaliana
TGACRKST
ASMYGTCA		 PBM
Sullivan et al.(2014)
pTH9798 		0.748 0.675
KNAT4
M01238_2.00 		Arabidopsis thaliana
NNGACNNNN
NNNNGTCNN		 PBM
Lambert et al.(2019)
pTH9968 		0.744 0.650
KNAT3
M02051_2.00 		Arabidopsis thaliana
NNNGACVBNN
NNVBGTCNNN		 PBM
Weirauch et al.(2014)
pTH7600 		0.744 0.650
HOS66
M02156_2.00 		Oryza sativa
NNNNDHNN
NNDHNNNN		 PBM
Weirauch et al.(2014)
pTH8332 		0.731 0.675
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.697 0.525
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.697 0.525
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.697 0.525
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.697 0.525
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.655 0.525
PK25034.1
M01254_2.00 		Cannabis sativa
NNTGACRKBN
NVMYGTCANN		 PBM
Lambert et al.(2019)
pTH11259 		0.624 0.850
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.607 0.500
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_4BS_1DACC49DE.1 Homeodomain 1 40

Links

Other Homeodomain family TFs
Other Triticum aestivum TFs

1239 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OBART12G09450 Oryza barthii OBART12G09450 N
OBART12G09480 Oryza barthii OBART12G09480 N
ORGLA12G0089600 Oryza glaberrima ORGLA12G0089600 N
OGLUM12G10670 Oryza glumaepatula OGLUM12G10670 N
OGLUM12G10680 Oryza glumaepatula OGLUM12G10680 N
BGIOSGA018453 Oryza indica BGIOSGA018453 N
BGIOSGA036334 Oryza indica BGIOSGA036334 N
BGIOSGA006672 Oryza indica BGIOSGA006672 N
OLONG_012662 Oryza longistaminata OLONG_012662 N
OLONG_012664 Oryza longistaminata OLONG_012664 N
OMERI06G17180 Oryza meridionalis OMERI06G17180 N
ONIVA12G01620 Oryza nivara ONIVA12G01620 N
ONIVA12G01580 Oryza nivara ONIVA12G01580 N
OPUNC06G14680 Oryza punctata OPUNC06G14680 N
OPUNC12G08600 Oryza punctata OPUNC12G08600 N
OPUNC12G08610 Oryza punctata OPUNC12G08610 N
ORUFI12G10490 Oryza rufipogon ORUFI12G10490 N
ORUFI12G10530 Oryza rufipogon ORUFI12G10530 N
OS12G0407000 Oryza sativa OS12G0407000 N