OBART12G09450 (Oryza barthii)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 OBART12G09450 T255010_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OBART12G09450.1 MADS box 22 69

Links

Other MADS box family TFs
Other Oryza barthii TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA006672 Oryza indica BGIOSGA006672 N 1.000
BGIOSGA018453 Oryza indica BGIOSGA018453 N 1.000
OGLUM12G10680 Oryza glumaepatula OGLUM12G10680 N 1.000
ONIVA12G01580 Oryza nivara ONIVA12G01580 N 1.000
ORGLA12G0089600 Oryza glaberrima ORGLA12G0089600 N 1.000
ORUFI12G10490 Oryza rufipogon ORUFI12G10490 N 1.000
OS12G0407000 Oryza sativa OS12G0407000 N 1.000
OLONG_012664 Oryza longistaminata OLONG_012664 N 0.958
OPUNC12G08600 Oryza punctata OPUNC12G08600 N 0.938
OBART12G09480 Oryza barthii OBART12G09480 N 0.833
OGLUM12G10670 Oryza glumaepatula OGLUM12G10670 N 0.833
ONIVA12G01620 Oryza nivara ONIVA12G01620 N 0.833
ORGLA12G0089800 Oryza glaberrima ORGLA12G0089800 N 0.833
ORUFI12G10530 Oryza rufipogon ORUFI12G10530 N 0.833
OPUNC06G14680 Oryza punctata OPUNC06G14680 N 0.812
BGIOSGA036334 Oryza indica BGIOSGA036334 N 0.771
OLONG_012662 Oryza longistaminata OLONG_012662 N 0.771
OGLUM06G17310 Oryza glumaepatula OGLUM06G17310 N 0.750
OMERI06G17150 Oryza meridionalis OMERI06G17150 N 0.750
ONIVA06G15740 Oryza nivara ONIVA06G15740 N 0.750
ORGLA06G0135200 Oryza glaberrima ORGLA06G0135200 N 0.750
ORUFI06G17170 Oryza rufipogon ORUFI06G17170 N 0.750
OS06G0504100 Oryza sativa OS06G0504100 N 0.750
Traes_4BL_9A17EA3B7 Triticum aestivum Traes_4BL_9A17EA3B7 I 0.724
OLONG_018852 Oryza longistaminata OLONG_018852 N 0.723
OMERI06G17180 Oryza meridionalis OMERI06G17180 N 0.708
OPUNC06G14730 Oryza punctata OPUNC06G14730 N 0.708
OGLUM06G17270 Oryza glumaepatula OGLUM06G17270 N 0.702