ENSP00000282549-D3 (Bos grunniens)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 ENSP00000282549-D3 T226005_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CRX
M00271_2.00 		Homo sapiens
NHDAKNN
NNMTHDN		 PBM
Barrera et al.(2016)
CRX_R41Q 		0.632 0.768
Otx1
M00396_2.00 		Mus musculus
NTAAKCYN
NRGMTTAN		 PBM
Berger et al.(2008)
Otx1_2325 		0.615 0.839
Otx2
M00418_2.00 		Mus musculus
NTAAKMBN
NVKMTTAN		 PBM
Berger et al.(2008)
Otx2_3441 		0.615 0.839
OTX1
M03116_2.00 		Homo sapiens
NNTAAKCGGATTANN
NNTAATCCGMTTANN		 SELEX
Jolma et al.(2013)
OTX1_1 		0.615 0.839
OTX1
M03117_2.00 		Homo sapiens
NTAATCSB
VSGATTAN		 SELEX
Jolma et al.(2013)
OTX1_2 		0.615 0.839
OTX2
M03197_2.00 		Homo sapiens
NHTAAKCGGATTANN
NNTAATCCGMTTADN		 SELEX
Jolma et al.(2013)
OTX2_1 		0.615 0.839
OTX2
M03198_2.00 		Homo sapiens
HTAATCCB
VGGATTAD		 SELEX
Jolma et al.(2013)
OTX2_2 		0.615 0.839
Otx1
M03249_2.00 		Mus musculus
NNTAAKCGGATTANN
NNTAATCCGMTTANN		 SELEX
Jolma et al.(2013)
Otx1_1 		0.615 0.839
Otx1
M03250_2.00 		Mus musculus
NTAATCCN
NGGATTAN		 SELEX
Jolma et al.(2013)
Otx1_2 		0.615 0.839
OTX1
M05022_2.00 		Homo sapiens
NTAATCCN
NGGATTAN		 SELEX
Yin et al.(2017)
OTX1_eDBD_HT-SELEX 		0.615 0.839
OTX1
M05024_2.00 		Homo sapiens
NTAATCCNNN
NNNGGATTAN		 SELEX
Yin et al.(2017)
OTX1_FL_HT-SELEX 		0.615 0.839
OTX2
M05251_2.00 		Homo sapiens
NTAATCCN
NGGATTAN		 SELEX
Yin et al.(2017)
OTX2_FL_HT-SELEX 		0.615 0.839
OTX2
M09153_2.00 		Homo sapiens
BYTAATCCYYN
NRRGGATTARV		 Misc
Kulakovskiy et al.(2013)
OTX2_HUMAN.H11MO.0.A 		0.615 0.839
Otx2
M09183_2.00 		Mus musculus
HTAATCCYNYNN
NNRNRGGATTAD		 Misc
Kulakovskiy et al.(2013)
OTX2_MOUSE.H11MO.0.A 		0.615 0.839
Otx2
M09569_2.00 		Mus musculus
NHTAATCCHB
VDGGATTADN		 Misc
Heinz et al.(2010)
EpiLC-Otx2_GSE56098 		0.615 0.839
OTX1
M10673_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OTX1_Q5 		0.615 0.839
OTX2
M10727_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OTX2_Q3_01 		0.615 0.839
OTX2
M10728_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OTX2_Q3 		0.615 0.839
OTX1
M05023_2.00 		Homo sapiens
NTAATCCN
NGGATTAN		 SELEX
Yin et al.(2017)
OTX1_eDBD_Methyl-HT-SELEX 		0.615 0.839
OTX1
M05025_2.00 		Homo sapiens
HTAATCCNHN
NDNGGATTAD		 SELEX
Yin et al.(2017)
OTX1_FL_Methyl-HT-SELEX 		0.615 0.839
OTX2
M05252_2.00 		Homo sapiens
NTAATCCN
NGGATTAN		 SELEX
Yin et al.(2017)
OTX2_FL_Methyl-HT-SELEX 		0.615 0.839
oc
M03808_2.00 		Drosophila melanogaster
HTAATCCB
VGGATTAD		 SELEX
Nitta et al.(2015)
oc_1 		0.614 0.821
oc
M06502_2.00 		Drosophila melanogaster
TAATCC
GGATTA		 B1H
Mathelier et al.(2014)
MA0234.1 		0.614 0.821
oc
M06282_2.00 		Drosophila melanogaster
WTAATCC
GGATTAW		 B1H
Zhu et al.(2011)
Oc_Cell_FBgn0004102 		0.614 0.821
oc
M06283_2.00 		Drosophila melanogaster
NTAATCCB
VGGATTAN		 B1H
Zhu et al.(2011)
Oc_SOLEXA_FBgn0004102 		0.614 0.821
oc
M09681_2.00 		Drosophila melanogaster
HTAATCCN
NGGATTAD		 Misc
Kulakovskiy et al.(2009)
oc 		0.614 0.821
CRX
M00275_2.00 		Homo sapiens
NMTAATCCSN
NSGGATTAKN		 PBM
Barrera et al.(2016)
CRX_V66I 		0.609 0.768
CRX
M00274_2.00 		Homo sapiens
NMTAATCCSN
NSGGATTAKN		 PBM
Barrera et al.(2016)
CRX_REF 		0.599 0.750
Crx
M00489_2.00 		Mus musculus
NWAAKMBN
NVKMTTWN		 PBM
Berger et al.(2008)
Crx_3485 		0.599 0.750
CRX
M04949_2.00 		Homo sapiens
NTAATCCN
NGGATTAN		 SELEX
Yin et al.(2017)
CRX_FL_HT-SELEX 		0.599 0.750
Crx
M08139_2.00 		Mus musculus
YTAATCCYCYY
RRGRGGATTAR		 ChIP-seq
Mathelier et al.(2014)
MA0467.1 		0.599 0.750
CRX
M09132_2.00 		Homo sapiens
BYTAATCCBHYYN
NRRDVGGATTARV		 Misc
Kulakovskiy et al.(2013)
CRX_HUMAN.H11MO.0.B 		0.599 0.750
Crx
M09208_2.00 		Mus musculus
BYTAATCCBHYYN
NRRDVGGATTARV		 Misc
Kulakovskiy et al.(2013)
CRX_MOUSE.H11MO.0.A 		0.599 0.750
Crx
M09577_2.00 		Mus musculus
NYTAATCC
GGATTARN		 Misc
Heinz et al.(2010)
Retina-Crx_GSE20012 		0.599 0.750
CRX
M10647_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CRX_Q4_01 		0.599 0.750
CRX
M10648_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CRX_Q4_02 		0.599 0.750
CRX
M00272_2.00 		Homo sapiens
NNHNATNN
NNATNDNN		 PBM
Barrera et al.(2016)
CRX_R41W 		0.599 0.750
CRX
M00273_2.00 		Homo sapiens
NNYTAATCCVN
NBGGATTARNN		 PBM
Barrera et al.(2016)
CRX_R90W 		0.599 0.750
CRX
M04950_2.00 		Homo sapiens
HTAATCCN
NGGATTAD		 SELEX
Yin et al.(2017)
CRX_FL_Methyl-HT-SELEX 		0.599 0.750
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000282549-D3 Homeodomain 39 94

Links

Other Homeodomain family TFs
Other Bos grunniens TFs

242 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000005266 Ailuropoda melanoleuca ENSAMEG00000005266 I 0.000
Alligator_sinensis_CCG008208.1 Alligator sinensis Alligator_sinensis_CCG008208.1 I 0.000
ENSAPLG00000016199 Anas platyrhynchos ENSAPLG00000016199 I 0.000
OVOL2 Anolis carolinensis ENSACAG00000014216 I 0.000
Afo_R007843 Aptenodytes forsteri Afo_R007843 I 0.000
ENSBTAP00000011067-D1 Bos grunniens ENSBTAP00000011067-D1 I 0.000
OVOL2 Bos taurus ENSBTAG00000008410 I 0.000
Brh_R002739 Buceros rhinoceros Brh_R002739 I 0.000
OVOL2 Callithrix jacchus ENSCJAG00000005049 I 0.000
Aan_R006310 Calypte anna Aan_R006310 I 0.000
OVOL2 Canis familiaris ENSCAFG00000005453 I 0.000
ENSCPOG00000007912 Cavia porcellus ENSCPOG00000007912 I 0.000
Cmyd_10010114 Chelonia mydas Cmyd_10010114 I 0.000
ENSCSAG00000011547 Chlorocebus sabaeus ENSCSAG00000011547 I 0.000
Ovol2 Dipodomys ordii ENSDORG00000016697 I 0.000
OVOL2 Echinops telfairi ENSETEG00000006907 I 0.000
OVOL2 Equus caballus ENSECAG00000007899 I 0.000
ENSFALG00000007594 Ficedula albicollis ENSFALG00000007594 I 0.000
OVOL2 Gallus gallus ENSGALG00000008702 I 0.000
OVOL2 Gorilla gorilla ENSGGOG00000024444 I 0.000
OVOL2 Homo sapiens ENSG00000125850 D 0.000
ENSSTOG00000024979 Ictidomys tridecemlineatus ENSSTOG00000024979 I 0.000
OVOL2 Loxodonta africana ENSLAFG00000010597 I 0.000
ENSP00000278780 Macaca fascicularis ENSP00000278780 I 0.000
ENSMMUG00000021621 Macaca mulatta ENSMMUG00000021621 I 0.000
ENSMEUG00000011922 Macropus eugenii ENSMEUG00000011922 I 0.000
ENSMGAG00000006770 Meleagris gallopavo ENSMGAG00000006770 I 0.000
ENSMICG00000017455 Microcebus murinus ENSMICG00000017455 I 0.000
OVOL2 Monodelphis domestica ENSMODG00000005504 I 0.000
ENSMPUG00000001295 Mustela putorius furo ENSMPUG00000001295 I 0.000
Ovol2 Mus musculus ENSMUSG00000037279 D 0.000
Myotis_brandtii_Ovol2_10029083 Myotis brandtii Myotis_brandtii_Ovol2_10029083 I 0.000
ENSMLUG00000026760 Myotis lucifugus ENSMLUG00000026760 I 0.000
ENSNLEG00000009741 Nomascus leucogenys ENSNLEG00000009741 I 0.000
OVOL2 Ochotona princeps ENSOPRG00000015054 I 0.000
Ogr08372 Ophisaurus gracilis Ogr08372 I 0.000
ENSOANG00000001250 Ornithorhynchus anatinus ENSOANG00000001250 I 0.000
OVOL2 Oryctolagus cuniculus ENSOCUG00000012116 I 0.000
OVOL2 Otolemur garnettii ENSOGAG00000030325 I 0.000
ENSOARG00000018244 Ovis aries ENSOARG00000018244 I 0.000
OVOL2 Pan troglodytes ENSPTRG00000013280 I 0.000
ENSPANG00000025538 Papio anubis ENSPANG00000025538 I 0.000
ENSPSIG00000006768 Pelodiscus sinensis ENSPSIG00000006768 I 0.000
Pvit_03654 Pogona vitticeps Pvit_03654 I 0.000
ENSPPYG00000010732 Pongo abelii ENSPPYG00000010732 I 0.000
OVOL2 Pteropus vampyrus ENSPVAG00000001140 I 0.000
Ovol2 Rattus norvegicus ENSRNOG00000006850 I 0.000
ENSSHAG00000018466 Sarcophilus harrisii ENSSHAG00000018466 I 0.000
ENSSARG00000006563 Sorex araneus ENSSARG00000006563 I 0.000
OVOL2 Taeniopygia guttata ENSTGUG00000005909 I 0.000
ENSTSYG00000012790 Tarsius syrichta ENSTSYG00000012790 I 0.000
OVOL2 Tursiops truncatus ENSTTRG00000016430 I 0.000
Tal_R010801 Tyto alba Tal_R010801 I 0.000
ovol2 Xenopus tropicalis XB-GENE-854193 I 0.000