Pvit_03654 (Pogona vitticeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pvit_03654 T136991_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OVOL2
M00235_2.00 		Homo sapiens
NCCGYTANNN
NNNTARCGGN		 PBM
Barrera et al.(2016)
OVOL2_REF 		0.774 0.880
OVOL2
M04445_2.00 		Homo sapiens
NNHCCGYTANNHN
NDNNTARCGGDNN		 SELEX
Yin et al.(2017)
OVOL2_eDBD_HT-SELEX 		0.774 0.880
OVOL2
M04447_2.00 		Homo sapiens
DDWCCGTTABNHN
NDNVTAACGGWHH		 SELEX
Yin et al.(2017)
OVOL2_FL_HT-SELEX 		0.774 0.880
OVOL2
M10207_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MOVOB_01 		0.774 0.880
OVOL2
M04446_2.00 		Homo sapiens
NNWCCGTTANNHN
NDNNTAACGGWNN		 SELEX
Yin et al.(2017)
OVOL2_eDBD_Methyl-HT-SELEX 		0.774 0.880
OVOL2
M04448_2.00 		Homo sapiens
DDWCCGTTABNHN
NDNVTAACGGWHH		 SELEX
Yin et al.(2017)
OVOL2_FL_Methyl-HT-SELEX 		0.774 0.880
Ovol2
M08993_2.00 		Mus musculus
HCCGTTAN
NTAACGGD		 Misc
Kulakovskiy et al.(2013)
OVOL2_MOUSE.H11MO.0.C 		0.764 0.880
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_03654 C2H2 ZF 102 124
Pvit_03654 C2H2 ZF 128 152
Pvit_03654 C2H2 ZF 158 181
Pvit_03654 C2H2 ZF 197 220

Links

Other C2H2 ZF family TFs
Other Pogona vitticeps TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ogr08372 Ophisaurus gracilis Ogr08372 I 0.807
Aan_R006310 Calypte anna Aan_R006310 I 0.784
OVOL2 Gallus gallus ENSGALG00000008702 I 0.784
OVOL2 Taeniopygia guttata ENSTGUG00000005909 I 0.784
ENSMGAG00000006770 Meleagris gallopavo ENSMGAG00000006770 I 0.784
Afo_R007843 Aptenodytes forsteri Afo_R007843 I 0.784
ENSFALG00000007594 Ficedula albicollis ENSFALG00000007594 I 0.784
Tal_R010801 Tyto alba Tal_R010801 I 0.784
Brh_R002739 Buceros rhinoceros Brh_R002739 I 0.784
ENSMEUG00000011922 Macropus eugenii ENSMEUG00000011922 I 0.782
ENSSHAG00000018466 Sarcophilus harrisii ENSSHAG00000018466 I 0.782
OVOL2 Monodelphis domestica ENSMODG00000005504 I 0.782
ENSCPOG00000007912 Cavia porcellus ENSCPOG00000007912 I 0.780
ENSAMEG00000005266 Ailuropoda melanoleuca ENSAMEG00000005266 I 0.779
OVOL2 Felis catus ENSFCAG00000027530 I 0.779
ENSMPUG00000001295 Mustela putorius furo ENSMPUG00000001295 I 0.779
ovol2 Xenopus tropicalis XB-GENE-854193 I 0.778
OVOL2 Pteropus vampyrus ENSPVAG00000001140 I 0.777
ENSSTOG00000024979 Ictidomys tridecemlineatus ENSSTOG00000024979 I 0.777
ENSSARG00000006563 Sorex araneus ENSSARG00000006563 I 0.776
Ovol2 Dipodomys ordii ENSDORG00000016697 I 0.776
Alligator_sinensis_CCG008208.1 Alligator sinensis Alligator_sinensis_CCG008208.1 I 0.775
ENSOANG00000001250 Ornithorhynchus anatinus ENSOANG00000001250 I 0.775
OVOL2 Homo sapiens ENSG00000125850 D 0.774
OVOL2 Gorilla gorilla ENSGGOG00000024444 I 0.774
OVOL2 Loxodonta africana ENSLAFG00000010597 I 0.774
ENSMLUG00000026760 Myotis lucifugus ENSMLUG00000026760 I 0.774
OVOL2 Equus caballus ENSECAG00000007899 I 0.774
ENSCSAG00000011547 Chlorocebus sabaeus ENSCSAG00000011547 I 0.774
ENSAPLG00000016199 Anas platyrhynchos ENSAPLG00000016199 I 0.774
Myotis_brandtii_Ovol2_10029083 Myotis brandtii Myotis_brandtii_Ovol2_10029083 I 0.774
ENSP00000278780 Macaca fascicularis ENSP00000278780 I 0.774
ENSMMUG00000021621 Macaca mulatta ENSMMUG00000021621 I 0.774
ENSMICG00000017455 Microcebus murinus ENSMICG00000017455 I 0.774
ENSPANG00000025538 Papio anubis ENSPANG00000025538 I 0.774
OVOL2 Oryctolagus cuniculus ENSOCUG00000012116 I 0.774
OVOL2 Pan troglodytes ENSPTRG00000013280 I 0.774
OVOL2 Otolemur garnettii ENSOGAG00000030325 I 0.774
ENSPPYG00000010732 Pongo abelii ENSPPYG00000010732 I 0.774
ENSNLEG00000009741 Nomascus leucogenys ENSNLEG00000009741 I 0.774
OVOL2 Anolis carolinensis ENSACAG00000014216 I 0.772
ENSOARG00000018244 Ovis aries ENSOARG00000018244 I 0.771
Cmyd_10010114 Chelonia mydas Cmyd_10010114 I 0.770
OVOL2 Echinops telfairi ENSETEG00000006907 I 0.770
ENSPSIG00000006768 Pelodiscus sinensis ENSPSIG00000006768 I 0.770
OVOL2 Canis familiaris ENSCAFG00000005453 I 0.767
OVOL2 Ochotona princeps ENSOPRG00000015054 I 0.766
Ovol2 Rattus norvegicus ENSRNOG00000006850 I 0.764
Ovol2 Mus musculus ENSMUSG00000037279 D 0.764
OVOL2 Tursiops truncatus ENSTTRG00000016430 I 0.759
OVOL2 Bos taurus ENSBTAG00000008410 I 0.759
ENSBTAP00000011067-D1 Bos grunniens ENSBTAP00000011067-D1 I 0.759