Pm023405 (Prunus mume)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Pm023405 T226675_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HAT2
M06929_2.00 		Arabidopsis thaliana
NHAATGATTRN
NYAATCATTDN		 Dap-seq
OMalley et al.(2016)
HAT2_colamp_a 		0.832 0.895
HAT2
M06930_2.00 		Arabidopsis thaliana
WNYAATCATWD
HWATGATTRNW		 Dap-seq
OMalley et al.(2016)
HAT2_col_v31 		0.832 0.895
HAT22
M06926_2.00 		Arabidopsis thaliana
NNYAATCATT
AATGATTRNN		 Dap-seq
OMalley et al.(2016)
HAT22_col_a 		0.824 0.807
HAT1
M02047_2.00 		Arabidopsis thaliana
NMATGATTRN
NYAATCATKN		 PBM
Weirauch et al.(2014)
pTH8107 		0.803 0.877
HAT1
M06922_2.00 		Arabidopsis thaliana
NHAATGATTRNNWDW
WHWNNYAATCATTDN		 Dap-seq
OMalley et al.(2016)
HAT1_col_a 		0.803 0.877
HAT1
M06923_2.00 		Arabidopsis thaliana
NYAATCATTDN
NHAATGATTRN		 Dap-seq
OMalley et al.(2016)
HAT1_colamp_a 		0.803 0.877
ATHB-4
M01065_2.00 		Arabidopsis thaliana
NBMTGCATRNN
NNYATGCAKVN		 PBM
Sullivan et al.(2014)
pTH8184 		0.793 0.877
ATHB-4
M02042_2.00 		Arabidopsis thaliana
NNWTNATTRN
NYAATNAWNN		 PBM
Weirauch et al.(2014)
pTH8667 		0.793 0.877
HAT3
M00728_2.00 		Arabidopsis thaliana
DTGATTRV
BYAATCAH		 PBM
Chang et al.(2013)
pTH7400 		0.793 0.842
ATHB-X
M06902_2.00 		Arabidopsis thaliana
HHAATRATTRN
NYAATYATTDD		 Dap-seq
OMalley et al.(2016)
ATHB18_col_a 		0.773 0.684
ATHB-X
M06903_2.00 		Arabidopsis thaliana
NYAATGATTRV
BYAATCATTRN		 Dap-seq
OMalley et al.(2016)
ATHB18_colamp_a 		0.773 0.684
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm023405 Homeodomain 144 200

Links

Other Homeodomain family TFs
Other Prunus mume TFs

694 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000000752 Ailuropoda melanoleuca ENSAMEG00000000752 I 0.000
ENSAMEG00000003872 Ailuropoda melanoleuca ENSAMEG00000003872 I 0.000
Alligator_sinensis_CCG018668.1 Alligator sinensis Alligator_sinensis_CCG018668.1 I 0.000
Alligator_sinensis_CCG020455.1 Alligator sinensis Alligator_sinensis_CCG020455.1 I 0.000
ENSAPLG00000002385 Anas platyrhynchos ENSAPLG00000002385 I 0.000
ZNF143 Anolis carolinensis ENSACAG00000009338 I 0.000
Afo_R002092 Aptenodytes forsteri Afo_R002092 I 0.000
Afo_R014591 Aptenodytes forsteri Afo_R014591 I 0.000
ENSAMXG00000003833 Astyanax mexicanus ENSAMXG00000003833 I 0.000
ENSAMXG00000008869 Astyanax mexicanus ENSAMXG00000008869 I 0.000
BGLB001048 Biomphalaria glabrata BGLB001048 I 0.000
ENSBTAP00000008112-D1 Bos grunniens ENSBTAP00000008112-D1 I 0.000
ENSP00000379847-D1 Bos grunniens ENSP00000379847-D1 I 0.000
ZNF76 Bos taurus ENSBTAG00000006170 I 0.000
estExt_fgenesh2_pg.C_1970081 Branchiostoma floridae estExt_fgenesh2_pg.C_1970081 I 0.000
Brh_R005520 Buceros rhinoceros Brh_R005520 I 0.000
ZNF143 Callithrix jacchus ENSCJAG00000011327 I 0.000
ZNF76 Callithrix jacchus ENSCJAG00000015519 I 0.000
Aan_R006576 Calypte anna Aan_R006576 I 0.000
ZNF76 Canis familiaris ENSCAFG00000001304 I 0.000
ZNF143 Canis familiaris ENSCAFG00000007373 I 0.000
ZNF143 Cavia porcellus ENSCPOG00000003109 I 0.000
ZNF76 Cavia porcellus ENSCPOG00000007381 I 0.000
Cmyd_10011173 Chelonia mydas Cmyd_10011173 I 0.000
ENSCSAG00000004520 Chlorocebus sabaeus ENSCSAG00000004520 I 0.000
ENSCSAG00000009955 Chlorocebus sabaeus ENSCSAG00000009955 I 0.000
ZNF76 Choloepus hoffmanni ENSCHOG00000003197 I 0.000
znf76 Danio rerio ENSDARG00000013279 I 0.000
znf143b Danio rerio ENSDARG00000041581 I 0.000
ZNF76 Dasypus novemcinctus ENSDNOG00000015856 I 0.000
ZNF76 Equus caballus ENSECAG00000014843 I 0.000
ZNF143 Equus caballus ENSECAG00000018889 I 0.000
ZNF143 Erinaceus europaeus ENSEEUG00000000955 I 0.000
ZNF143 Felis catus ENSFCAG00000002342 I 0.000
ZNF76 Felis catus ENSFCAG00000005893 I 0.000
ENSFALG00000000985 Ficedula albicollis ENSFALG00000000985 I 0.000
ENSFALG00000003698 Ficedula albicollis ENSFALG00000003698 I 0.000
ENSGMOG00000001888 Gadus morhua ENSGMOG00000001888 I 0.000
ZNF143 Gallus gallus ENSGALG00000005787 I 0.000
znf143b Gasterosteus aculeatus ENSGACG00000009776 I 0.000
Gfo_R002960 Geospiza fortis Gfo_R002960 I 0.000
Gfo_R011843 Geospiza fortis Gfo_R011843 I 0.000
ZNF76 Gorilla gorilla ENSGGOG00000014188 I 0.000
ZNF76 Homo sapiens ENSG00000065029 D 0.000
ZNF143 Homo sapiens ENSG00000166478 D 0.000
ENSSTOG00000000256 Ictidomys tridecemlineatus ENSSTOG00000000256 I 0.000
ENSSTOG00000009647 Ictidomys tridecemlineatus ENSSTOG00000009647 I 0.000
ENSLACG00000017669 Latimeria chalumnae ENSLACG00000017669 I 0.000
ENSLOCG00000003619 Lepisosteus oculatus ENSLOCG00000003619 I 0.000
ENSLOCG00000011655 Lepisosteus oculatus ENSLOCG00000011655 I 0.000
LotgiG222832 Lottia gigantea LotgiG222832 I 0.000
ZNF143 Loxodonta africana ENSLAFG00000004487 I 0.000
ZNF76 Loxodonta africana ENSLAFG00000026071 I 0.000
ENSP00000363064 Macaca fascicularis ENSP00000363064 I 0.000
ENSP00000379847 Macaca fascicularis ENSP00000379847 I 0.000
ZNF143 Macaca mulatta ENSMMUG00000008758 I 0.000
ZNF76 Macaca mulatta ENSMMUG00000023559 I 0.000
ENSMEUG00000003014 Macropus eugenii ENSMEUG00000003014 I 0.000
ZNF143 Meleagris gallopavo ENSMGAG00000006206 I 0.000
ZNF143 Microcebus murinus ENSMICG00000004353 I 0.000
ZNF143 Monodelphis domestica ENSMODG00000007909 I 0.000
ZNF76 Monodelphis domestica ENSMODG00000013806 I 0.000
ENSMPUG00000003522 Mustela putorius furo ENSMPUG00000003522 I 0.000
ENSMPUG00000012796 Mustela putorius furo ENSMPUG00000012796 I 0.000
Zfp523 Mus musculus ENSMUSG00000024220 I 0.000
Zfp143 Mus musculus ENSMUSG00000061079 D 0.000
Myotis_brandtii_ZNF143_10021171 Myotis brandtii Myotis_brandtii_ZNF143_10021171 I 0.000
Myotis_brandtii_ZNF76_10017771 Myotis brandtii Myotis_brandtii_ZNF76_10017771 I 0.000
ZNF143 Myotis lucifugus ENSMLUG00000000213 I 0.000
ZNF76 Myotis lucifugus ENSMLUG00000008610 I 0.000
ZNF143 Ochotona princeps ENSOPRG00000005466 I 0.000
ENSOPRG00000009136 Ochotona princeps ENSOPRG00000009136 I 0.000
Ocbimv22038914m.g Octopus bimaculoides Ocbimv22038914m.g I 0.000
Ogr18895 Ophisaurus gracilis Ogr18895 I 0.000
ENSONIG00000015524 Oreochromis niloticus ENSONIG00000015524 I 0.000
ZNF143 Ornithorhynchus anatinus ENSOANG00000005853 I 0.000
ZNF143 Oryctolagus cuniculus ENSOCUG00000005226 I 0.000
ZNF76 Oryctolagus cuniculus ENSOCUG00000015630 I 0.000
znf143b Oryzias latipes ENSORLG00000001130 I 0.000
ZNF76 Otolemur garnettii ENSOGAG00000002935 I 0.000
ZNF143 Otolemur garnettii ENSOGAG00000011518 I 0.000
ENSOARG00000012477 Ovis aries ENSOARG00000012477 I 0.000
ZNF143 Pan troglodytes ENSPTRG00000003349 I 0.000
ZNF76 Pan troglodytes ENSPTRG00000018080 I 0.000
ENSPANG00000002501 Papio anubis ENSPANG00000002501 I 0.000
ENSPANG00000021154 Papio anubis ENSPANG00000021154 I 0.000
ENSPSIG00000005652 Pelodiscus sinensis ENSPSIG00000005652 I 0.000
ENSPSIG00000009683 Pelodiscus sinensis ENSPSIG00000009683 I 0.000
ENSPFOG00000008911 Poecilia formosa ENSPFOG00000008911 I 0.000
Pvit_03784 Pogona vitticeps Pvit_03784 I 0.000
ENSPPYG00000016525 Pongo abelii ENSPPYG00000016525 I 0.000
ZNF76 Pteropus vampyrus ENSPVAG00000008041 I 0.000
Zfp523 Rattus norvegicus ENSRNOG00000000501 I 0.000
Zfp143 Rattus norvegicus ENSRNOG00000010087 I 0.000
Sakowv30036637m.g Saccoglossus kowalevskii Sakowv30036637m.g I 0.000
Sakowv30044960m.g Saccoglossus kowalevskii Sakowv30044960m.g I 0.000
ENSSHAG00000009934 Sarcophilus harrisii ENSSHAG00000009934 I 0.000
ZNF143 Sorex araneus ENSSARG00000007780 I 0.000
SMAR015659 Strigamia maritima SMAR015659 I 0.000
ZNF76 Sus scrofa ENSSSCG00000001537 I 0.000
ZNF76 Taeniopygia guttata ENSTGUG00000001745 I 0.000
ENSTGUG00000008153 Taeniopygia guttata ENSTGUG00000008153 I 0.000
znf143 Takifugu rubripes ENSTRUG00000009324 I 0.000
ENSTSYG00000004324 Tarsius syrichta ENSTSYG00000004324 I 0.000
znf143b Tetraodon nigroviridis ENSTNIG00000013739 I 0.000
ZNF76 Tursiops truncatus ENSTTRG00000009380 I 0.000
ZNF143 Tursiops truncatus ENSTTRG00000015353 I 0.000
Tal_R001092 Tyto alba Tal_R001092 I 0.000
Tal_R002540 Tyto alba Tal_R002540 I 0.000
AAH73068 Xenopus laevis AAH73068 I 0.000
znf143.S Xenopus laevis XB-GENE-1012509 I 0.000
znf143 Xenopus tropicalis XB-GENE-1012504 I 0.000
ENSXMAG00000005152 Xiphophorus maculatus ENSXMAG00000005152 I 0.000