Carubv10025737m.g (Capsella rubella)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Carubv10025737m.g T228350_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RLT1
M02038_2.00 		Arabidopsis thaliana
NDHTCWWN
NWWGADHN		 PBM
Weirauch et al.(2014)
pTH5432 		0.681 0.754
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10025737m Homeodomain 24 80

Links

Other Homeodomain family TFs
Other Capsella rubella TFs

131 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000017202 Ailuropoda melanoleuca ENSAMEG00000017202 N
ENSAPLG00000002277 Anas platyrhynchos ENSAPLG00000002277 N
Afo_R001817 Aptenodytes forsteri Afo_R001817 N
ZNF319 Bos taurus ENSBTAG00000045572 N
ZNF319 Callithrix jacchus ENSCJAG00000022826 N
Aan_R013485 Calypte anna Aan_R013485 N
ZNF319 Canis familiaris ENSCAFG00000008559 N
Cmyd_10003977 Chelonia mydas Cmyd_10003977 N
ENSCSAG00000018864 Chlorocebus sabaeus ENSCSAG00000018864 N
ENSDORG00000001887 Dipodomys ordii ENSDORG00000001887 N
ZNF319 Felis catus ENSFCAG00000024689 N
ENSFALG00000014292 Ficedula albicollis ENSFALG00000014292 N
ZNF319 Gallus gallus ENSGALG00000000999 N
Gfo_R016059 Geospiza fortis Gfo_R016059 N
ZNF319 Gorilla gorilla ENSGGOG00000017145 N
ZNF319 Homo sapiens ENSG00000166188 N
ENSSTOG00000019944 Ictidomys tridecemlineatus ENSSTOG00000019944 N
ENSP00000299237 Macaca fascicularis ENSP00000299237 N
ZNF319 Macaca mulatta ENSMMUG00000022668 N
ENSNLEG00000003339 Nomascus leucogenys ENSNLEG00000003339 N
ZNF319 Ornithorhynchus anatinus ENSOANG00000006540 N
ENSOARG00000001098 Ovis aries ENSOARG00000001098 N
ENSPSIG00000004303 Pelodiscus sinensis ENSPSIG00000004303 N
Pvit_06816 Pogona vitticeps Pvit_06816 N
ZNF319 Pteropus vampyrus ENSPVAG00000004612 N
Zfp319 Rattus norvegicus ENSRNOG00000013460 N
ZNF319 Taeniopygia guttata ENSTGUG00000004796 N
Tal_R002390 Tyto alba Tal_R002390 N