CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.005G234300
(
Gossypium raimondii
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Gorai.005G234300
T228717_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.005G234300.1
Homeodomain
861
913
THRRLGETEKQRLCESFRENQYPDRATKERLGKDLDMTFRQVSKWFENARWSF
Gorai.005G234300.2
Homeodomain
827
879
THRRLGETEKQRLCESFRENQYPDRATKERLGKDLDMTFRQVSKWFENARWSF
Gorai.005G234300.3
Homeodomain
849
901
THRRLGETEKQRLCESFRENQYPDRATKERLGKDLDMTFRQVSKWFENARWSF
Gorai.005G234300.4
Homeodomain
735
787
THRRLGETEKQRLCESFRENQYPDRATKERLGKDLDMTFRQVSKWFENARWSF
Gorai.005G234300.5
Homeodomain
735
787
THRRLGETEKQRLCESFRENQYPDRATKERLGKDLDMTFRQVSKWFENARWSF
Links
Other
Homeodomain
family TFs
Other
Gossypium raimondii
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava12724.valid.m1
Manihot esculenta
cassava12724.valid.m1
N
0.615
28152.m000873
Ricinus communis
28152.m000873
N
0.625