CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava12724.valid.m1
(
Manihot esculenta
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
cassava12724.valid.m1
T227031_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava12724.valid.m1
Homeodomain
818
871
SEYRRLGEAATQGLHKSFRENQYPNRTAKESLAKELGITFKQVNKWFENARWSF
Links
Other
Homeodomain
family TFs
Other
Manihot esculenta
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
28152.m000873
Ricinus communis
28152.m000873
N
0.758
Eucgr.G01324
Eucalyptus grandis
Eucgr.G01324
N
0.752
gene22839-v1.0-hybrid
Fragaria vesca
gene22839-v1.0-hybrid
N
0.623
Gorai.005G234300
Gossypium raimondii
Gorai.005G234300
N
0.615