CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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28152.m000873
(
Ricinus communis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
28152.m000873
T226959_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
28152.m000873
Homeodomain
713
764
YRRLGETVTKGLYRSFKENQYPDRDRKEHLAEELGITYQQVTKWFENARWSF
Links
Other
Homeodomain
family TFs
Other
Ricinus communis
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava12724.valid.m1
Manihot esculenta
cassava12724.valid.m1
N
0.758
Eucgr.G01324
Eucalyptus grandis
Eucgr.G01324
N
0.731
HAT3.1
Vitis vinifera
VIT_03s0091g00290
I
0.629
Gorai.005G234300
Gossypium raimondii
Gorai.005G234300
N
0.625
gene22839-v1.0-hybrid
Fragaria vesca
gene22839-v1.0-hybrid
N
0.602