MDP0000122897 (Malus domestica)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 MDP0000122897 T228963_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000122897 Homeodomain 214 268

Links

Other Homeodomain family TFs
Other Malus domestica TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_08927 Aegilops tauschii F775_08927 I
F775_32153 Aegilops tauschii F775_32153 I
AMTR_s00012p00251530 Amborella trichopoda AMTR_s00012p00251530 I
AMTR_s00101p00128190 Amborella trichopoda AMTR_s00101p00128190 I
Aquca_003_00124 Aquilegia coerulea Aquca_003_00124 I
Aquca_009_00074 Aquilegia coerulea Aquca_009_00074 I
Aquca_009_00923 Aquilegia coerulea Aquca_009_00923 I
PCL1 Arabidopsis lyrata fgenesh2_kg.5__1030__AT3G46640.2 I
fgenesh2_kg.8__1908__AT5G59570.1 Arabidopsis lyrata fgenesh2_kg.8__1908__AT5G59570.1 I
scaffold_301238.1 Arabidopsis lyrata scaffold_301238.1 I
MYBC1 Arabidopsis lyrata scaffold_402901.1 I
scaffold_600469.1 Arabidopsis lyrata scaffold_600469.1 I
MYBC1 Arabidopsis thaliana AT2G40970 I
AT3G10760 Arabidopsis thaliana AT3G10760 I
PCL1 Arabidopsis thaliana AT3G46640 I
AT5G05090 Arabidopsis thaliana AT5G05090 D
BOA Arabidopsis thaliana AT5G59570 I
Bostr.13129s0456 Boechera stricta Bostr.13129s0456 I
Bostr.18473s0293 Boechera stricta Bostr.18473s0293 I
Bostr.19424s0999 Boechera stricta Bostr.19424s0999 I
Bostr.26833s0280 Boechera stricta Bostr.26833s0280 I
Bostr.27991s0013 Boechera stricta Bostr.27991s0013 I
Bostr.9345s0035 Boechera stricta Bostr.9345s0035 I
BRADI1G47400 Brachypodium distachyon BRADI1G47400 I
BRADI1G69480 Brachypodium distachyon BRADI1G69480 I
BRADI2G25380 Brachypodium distachyon BRADI2G25380 I
BRADI2G54787 Brachypodium distachyon BRADI2G54787 I
BRADI2G62067 Brachypodium distachyon BRADI2G62067 I
BRADI3G54120 Brachypodium distachyon BRADI3G54120 I
Bo1g070860 Brassica oleracea Bo1g070860 I
Bo3g003150 Brassica oleracea Bo3g003150 I
Bo3g132770 Brassica oleracea Bo3g132770 I
Bo4g012890 Brassica oleracea Bo4g012890 I
Bo5g019990 Brassica oleracea Bo5g019990 I
Bo5g137150 Brassica oleracea Bo5g137150 I
Bo7g104190 Brassica oleracea Bo7g104190 I
Bo9g177390 Brassica oleracea Bo9g177390 I
Bra004593 Brassica rapa Bra004593 I
Bra005837 Brassica rapa Bra005837 I
Bra009087 Brassica rapa Bra009087 I
Bra012743 Brassica rapa Bra012743 I
Bra018204 Brassica rapa Bra018204 I
Bra029866 Brassica rapa Bra029866 I
Bra033809 Brassica rapa Bra033809 I
Bra034144 Brassica rapa Bra034144 I
PK02601.1 Cannabis sativa PK02601.1 I
PK05290.1 Cannabis sativa PK05290.1 I
PK23977.1 Cannabis sativa PK23977.1 I
Cagra.0448s0013 Capsella grandiflora Cagra.0448s0013 I
Cagra.0834s0003 Capsella grandiflora Cagra.0834s0003 I
Cagra.0995s0002 Capsella grandiflora Cagra.0995s0002 I
Cagra.1317s0057 Capsella grandiflora Cagra.1317s0057 I
Cagra.1504s0014 Capsella grandiflora Cagra.1504s0014 I
Cagra.1642s0062 Capsella grandiflora Cagra.1642s0062 I
Carubv10003130m.g Capsella rubella Carubv10003130m.g I
Carubv10014134m.g Capsella rubella Carubv10014134m.g I
Carubv10017603m.g Capsella rubella Carubv10017603m.g I
Carubv10024859m.g Capsella rubella Carubv10024859m.g I
Carubv10024931m.g Capsella rubella Carubv10024931m.g I
Carubv10026895m.g Capsella rubella Carubv10026895m.g I
evm.TU.supercontig_81.106 Carica papaya evm.TU.supercontig_81.106 I
evm.TU.supercontig_92.70 Carica papaya evm.TU.supercontig_92.70 I
CHLREDRAFT_130971 Chlamydomonas reinhardtii CHLREDRAFT_130971 I
IGS.gm_5_00099 Chlorella NC64A IGS.gm_5_00099 N
fgeneshCV_pg.C_scaffold_15000185 Chlorella vulgaris fgeneshCV_pg.C_scaffold_15000185 I
Ca_07144 Cicer arietinum Ca_07144 I
Ca_09080 Cicer arietinum Ca_09080 I
Ca_16282 Cicer arietinum Ca_16282 I
Cla008353 Citrullus lanatus Cla008353 I
Cla012286 Citrullus lanatus Cla012286 I
Cla017714 Citrullus lanatus Cla017714 I
Ciclev10004989m.g Citrus clementina Ciclev10004989m.g I
Ciclev10006586m.g Citrus clementina Ciclev10006586m.g N
Ciclev10012203m.g Citrus clementina Ciclev10012203m.g I
Ciclev10028658m.g Citrus clementina Ciclev10028658m.g I
orange1.1g020690m.g Citrus sinensis orange1.1g020690m.g I
orange1.1g040406m.g Citrus sinensis orange1.1g040406m.g N
orange1.1g047187m.g Citrus sinensis orange1.1g047187m.g I
gw1.15.242.1 Coccomyxa subellipsoidea C169 gw1.15.242.1 I
Cucsa.117700 Cucumis sativus Cucsa.117700 I
Cucsa.140020 Cucumis sativus Cucsa.140020 I
Cucsa.358530 Cucumis sativus Cucsa.358530 I
Eucgr.A02201 Eucalyptus grandis Eucgr.A02201 I
Eucgr.B02313 Eucalyptus grandis Eucgr.B02313 I
Eucgr.K01670 Eucalyptus grandis Eucgr.K01670 I
Thhalv10002605m.g Eutrema salsugineum Thhalv10002605m.g I
Thhalv10004402m.g Eutrema salsugineum Thhalv10004402m.g I
Thhalv10014387m.g Eutrema salsugineum Thhalv10014387m.g I
Thhalv10017945m.g Eutrema salsugineum Thhalv10017945m.g I
Thhalv10021133m.g Eutrema salsugineum Thhalv10021133m.g I
gene17673-v1.0-hybrid Fragaria vesca gene17673-v1.0-hybrid I
gene30204-v1.0-hybrid Fragaria vesca gene30204-v1.0-hybrid I
GLYMA02G21820 Glycine max GLYMA02G21820 I
GLYMA03G27890 Glycine max GLYMA03G27890 I
GLYMA11G14490 Glycine max GLYMA11G14490 I
GLYMA12G06406 Glycine max GLYMA12G06406 I
GLYMA19G30700 Glycine max GLYMA19G30700 I
Gorai.001G030600 Gossypium raimondii Gorai.001G030600 I
Gorai.001G112200 Gossypium raimondii Gorai.001G112200 I
Gorai.002G230800 Gossypium raimondii Gorai.002G230800 I
Gorai.003G129100 Gossypium raimondii Gorai.003G129100 I
Gorai.007G351500 Gossypium raimondii Gorai.007G351500 I
Gorai.009G097100 Gossypium raimondii Gorai.009G097100 I
MLOC_24056 Hordeum vulgare MLOC_24056 I
MLOC_24962 Hordeum vulgare MLOC_24962 I
MLOC_37446 Hordeum vulgare MLOC_37446 I
MLOC_76165 Hordeum vulgare MLOC_76165 I
LPERR01G31830 Leersia perrieri LPERR01G31830 I
LPERR01G39850 Leersia perrieri LPERR01G39850 I
LPERR03G08040 Leersia perrieri LPERR03G08040 I
LPERR05G13030 Leersia perrieri LPERR05G13030 I
Lus10005340.g Linum usitatissimum Lus10005340.g I
Lus10010442.g Linum usitatissimum Lus10010442.g I
Lus10012102.g Linum usitatissimum Lus10012102.g I
Lus10027291.g Linum usitatissimum Lus10027291.g I
Lus10038996.g Linum usitatissimum Lus10038996.g I
Lus10040780.g Linum usitatissimum Lus10040780.g I
Lus10041020.g Linum usitatissimum Lus10041020.g I
chr1.CM0269.130.nd Lotus japonicus chr1.CM0269.130.nd I
MDP0000669078 Malus domestica MDP0000669078 I
MDP0000672486 Malus domestica MDP0000672486 I
MDP0000846313 Malus domestica MDP0000846313 I
cassava19434.valid.m1 Manihot esculenta cassava19434.valid.m1 I
cassava20582.m1 Manihot esculenta cassava20582.m1 I
cassava34353.m1 Manihot esculenta cassava34353.m1 I
cassava35050.m1 Manihot esculenta cassava35050.m1 N
cassava37074.valid.m1 Manihot esculenta cassava37074.valid.m1 I
cassava37075.valid.m1 Manihot esculenta cassava37075.valid.m1 I
MTR_4g064730 Medicago truncatula MTR_4g064730 I
MTR_7g089010 Medicago truncatula MTR_7g089010 I
est_orfs.10_1861_4270447:1 Micromonas pusilla est_orfs.10_1861_4270447:1 I
EuGene.0000090108 Micromonas pusilla EuGene.0000090108 I
estExt_fgenesh2_pg.C_Chr_120081 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_120081 I
EuGene.0600010100 Micromonas sp RCC299 EuGene.0600010100 I
mgf008790m Mimulus guttatus mgf008790m I
mgf014801m Mimulus guttatus mgf014801m I
GSMUA_Achr10G02420_001 Musa acuminata GSMUA_Achr10G02420_001 I
GSMUA_Achr10G12590_001 Musa acuminata GSMUA_Achr10G12590_001 I
GSMUA_Achr11G14170_001 Musa acuminata GSMUA_Achr11G14170_001 I
GSMUA_Achr2G01920_001 Musa acuminata GSMUA_Achr2G01920_001 I
GSMUA_Achr5G07060_001 Musa acuminata GSMUA_Achr5G07060_001 I
GSMUA_Achr5G27500_001 Musa acuminata GSMUA_Achr5G27500_001 I
GSMUA_Achr8G05880_001 Musa acuminata GSMUA_Achr8G05880_001 I
GSMUA_AchrUn_randomG18750_001 Musa acuminata GSMUA_AchrUn_randomG18750_001 I
OBART01G37040 Oryza barthii OBART01G37040 I
OBART01G45440 Oryza barthii OBART01G45440 I
OBART03G08950 Oryza barthii OBART03G08950 I
OB03G19140 Oryza brachyantha OB03G19140 I
OB10G19740 Oryza brachyantha OB10G19740 N
ORGLA01G0309000 Oryza glaberrima ORGLA01G0309000 I
ORGLA01G0392100 Oryza glaberrima ORGLA01G0392100 I
ORGLA03G0086800 Oryza glaberrima ORGLA03G0086800 I
ORGLA05G0141400 Oryza glaberrima ORGLA05G0141400 I
OGLUM01G41000 Oryza glumaepatula OGLUM01G41000 I
OGLUM01G49830 Oryza glumaepatula OGLUM01G49830 I
OGLUM03G09080 Oryza glumaepatula OGLUM03G09080 I
BGIOSGA000023 Oryza indica BGIOSGA000023 I
BGIOSGA004786 Oryza indica BGIOSGA004786 I
RR21 Oryza indica BGIOSGA012149 I
BGIOSGA018058 Oryza indica BGIOSGA018058 I
OLONG_001321 Oryza longistaminata OLONG_001321 I
OLONG_002370 Oryza longistaminata OLONG_002370 I
OLONG_010516 Oryza longistaminata OLONG_010516 I
OMERI01G34110 Oryza meridionalis OMERI01G34110 I
OMERI01G42240 Oryza meridionalis OMERI01G42240 I
OMERI03G08390 Oryza meridionalis OMERI03G08390 I
OMERI05G06680 Oryza meridionalis OMERI05G06680 I
ONIVA01G41940 Oryza nivara ONIVA01G41940 I
ONIVA01G51730 Oryza nivara ONIVA01G51730 I
ONIVA05G17050 Oryza nivara ONIVA05G17050 I
ONIVA06G01160 Oryza nivara ONIVA06G01160 I
OPUNC01G35910 Oryza punctata OPUNC01G35910 I
OPUNC01G44410 Oryza punctata OPUNC01G44410 I
OPUNC03G08640 Oryza punctata OPUNC03G08640 I
OPUNC05G14480 Oryza punctata OPUNC05G14480 I
ORUFI01G40390 Oryza rufipogon ORUFI01G40390 I
ORUFI01G48960 Oryza rufipogon ORUFI01G48960 I
ORUFI03G09090 Oryza rufipogon ORUFI03G09090 I
OS01G0844900 Oryza sativa OS01G0844900 I
PCL1 Oryza sativa OS01G0971800 I
RR21 Oryza sativa OS03G0224200 I
OS05G0412000 Oryza sativa OS05G0412000 I
Pavir.Ba03246 Panicum virgatum Pavir.Ba03246 I
Pavir.Ea04181 Panicum virgatum Pavir.Ea04181 I
Pavir.Eb01200 Panicum virgatum Pavir.Eb01200 N
Pavir.Eb04079 Panicum virgatum Pavir.Eb04079 I
Pavir.Ia04946 Panicum virgatum Pavir.Ia04946 I
Pavir.Ib00921 Panicum virgatum Pavir.Ib00921 I
Pavir.J06465 Panicum virgatum Pavir.J06465 I
Pavir.J10623 Panicum virgatum Pavir.J10623 I
gw1.104.128.1 Physcomitrella patens gw1.104.128.1 I
gw1.27.80.1 Physcomitrella patens gw1.27.80.1 I
gw1.29.164.1 Physcomitrella patens gw1.29.164.1 I
gw1.29.165.1 Physcomitrella patens gw1.29.165.1 I
POPTR_0001s25040 Populus trichocarpa POPTR_0001s25040 I
POPTR_0006s03340 Populus trichocarpa POPTR_0006s03340 I
POPTR_0008s13490 Populus trichocarpa POPTR_0008s13490 I
POPTR_0009s03990 Populus trichocarpa POPTR_0009s03990 I
POPTR_0016s03240 Populus trichocarpa POPTR_0016s03240 I
Pm000693 Prunus mume Pm000693 I
Pm031149 Prunus mume Pm031149 I
PRUPE_ppa008837mg Prunus persica PRUPE_ppa008837mg I
PRUPE_ppa026577mg Prunus persica PRUPE_ppa026577mg I
29751.m001898 Ricinus communis 29751.m001898 I
30147.m014309 Ricinus communis 30147.m014309 N
30180.m001019 Ricinus communis 30180.m001019 I
SapurV1A.0015s0530 Salix purpurea SapurV1A.0015s0530 I
SapurV1A.0041s0350 Salix purpurea SapurV1A.0041s0350 I
SapurV1A.0128s0090 Salix purpurea SapurV1A.0128s0090 I
SapurV1A.0159s0180 Salix purpurea SapurV1A.0159s0180 I
SapurV1A.1916s0020 Salix purpurea SapurV1A.1916s0020 I
SELMODRAFT_36646 Selaginella moellendorffii SELMODRAFT_36646 I
Si002016m.g Setaria italica Si002016m.g I
Si002653m.g Setaria italica Si002653m.g I
Si034517m.g Setaria italica Si034517m.g I
Solyc06g005680.2 Solanum lycopersicum Solyc06g005680.2 I
Solyc06g076350.2 Solanum lycopersicum Solyc06g076350.2 I
Solyc10g078310.1 Solanum lycopersicum Solyc10g078310.1 I
Solyc10g080960.1 Solanum lycopersicum Solyc10g080960.1 I
PGSC0003DMG400002144 Solanum tuberosum PGSC0003DMG400002144 I
PGSC0003DMG400007174 Solanum tuberosum PGSC0003DMG400007174 I
PGSC0003DMG400028100 Solanum tuberosum PGSC0003DMG400028100 I
PGSC0003DMG400030328 Solanum tuberosum PGSC0003DMG400030328 I
Sb01g042400 Sorghum bicolor Sb01g042400 I
Sb03g039610 Sorghum bicolor Sb03g039610 I
Sb03g047330 Sorghum bicolor Sb03g047330 I
Sb09g020340 Sorghum bicolor Sb09g020340 I
TCM_041791 Theobroma cacao TCM_041791 I
TCM_045790 Theobroma cacao TCM_045790 I
TRAES3BF076800040CFD_g Triticum aestivum TRAES3BF076800040CFD_g I
Traes_4AS_6486B493A Triticum aestivum Traes_4AS_6486B493A I
Traes_4BL_941E7DE4D Triticum aestivum Traes_4BL_941E7DE4D I
Traes_4DL_2527CA8BF Triticum aestivum Traes_4DL_2527CA8BF I
Traes_6BL_790C095EE Triticum aestivum Traes_6BL_790C095EE I
Traes_6DL_D1C9CE275 Triticum aestivum Traes_6DL_D1C9CE275 I
TRIUR3_25342 Triticum urartu TRIUR3_25342 I
VIT_06s0004g05120 Vitis vinifera VIT_06s0004g05120 I
VIT_08s0040g00900 Vitis vinifera VIT_08s0040g00900 I
GRMZM2G067702 Zea mays GRMZM2G067702 I
GRMZM2G074908 Zea mays GRMZM2G074908 I
GRMZM2G099797 Zea mays GRMZM2G099797 I
GRMZM2G126834 Zea mays GRMZM2G126834 I
GRMZM2G398055 Zea mays GRMZM2G398055 I
GRMZM2G471600 Zea mays GRMZM2G471600 I