hdx (Xenopus tropicalis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 XB-GENE-853748 T230621_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HDX
M01246_2.00 		Homo sapiens
HNNNNNN
NNNNNND		 PBM
Lambert et al.(2019)
pTH11271 		0.864 0.946
Hdx
M00463_2.00 		Mus musculus
HNWYHNN
NNDRWND		 PBM
Berger et al.(2008)
Hdx_3845 		0.864 0.946
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAI61469 Homeodomain 377 436
XP_002938587 Homeodomain 25 83
XP_002938587 Homeodomain 461 520

Links

Other Homeodomain family TFs
Other Xenopus tropicalis TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG010381.1 Alligator sinensis Alligator_sinensis_CCG010381.1 I
AB04741.1 Alternaria brassicicola AB04741.1 I
Aqu1.225495 Amphimedon queenslandica Aqu1.225495 I
ENSAPLG00000010674 Anas platyrhynchos ENSAPLG00000010674 I
AARA003790 Anopheles arabiensis AARA003790 I
AGAP009986 Anopheles gambiae AGAP009986 D
AMAM020176 Anopheles maculatus AMAM020176 I
Afo_R011092 Aptenodytes forsteri Afo_R011092 I
Afo_R009272 Aptenodytes forsteri Afo_R009272 I
ATEG_05203 Aspergillus terreus CADATEAG00005116 I
ENSAMXG00000000335 Astyanax mexicanus ENSAMXG00000000335 I
COCC4DRAFT_49159 Bipolaris maydis COCC4DRAFT_49159 I
COCMIDRAFT_53102 Bipolaris oryzae COCMIDRAFT_53102 I
COCSADRAFT_107886 Bipolaris sorokiniana COCSADRAFT_107886 I
COCVIDRAFT_49416 Bipolaris victoriae COCVIDRAFT_49416 I
COCCADRAFT_44321 Bipolaris zeicola COCCADRAFT_44321 I
estExt_fgenesh2_pg.C_2210037 Branchiostoma floridae estExt_fgenesh2_pg.C_2210037 I
Brh_R010356 Buceros rhinoceros Brh_R010356 I
Brh_R000015 Buceros rhinoceros Brh_R000015 I
CBG25749 Caenorhabditis briggsae CBG25749 I
Aan_R015659 Calypte anna Aan_R015659 I
Aan_R003869 Calypte anna Aan_R003869 I
ENSCAFG00000010422 Canis familiaris ENSCAFG00000010422 I
CapteG100741 Capitella teleta CapteG100741 I
CapteG70907 Capitella teleta CapteG70907 I
CapteG49895 Capitella teleta CapteG49895 I
CapteG88319 Capitella teleta CapteG88319 I
ENSCSAG00000011743 Chlorocebus sabaeus ENSCSAG00000011743 I
Z519_11142 Cladophialophora bantiana Z519_11142 I
estExt_Genewise1.C_110663 Cochliobolus heterostrophus C5 estExt_Genewise1.C_110663 I
CCM_02544 Cordyceps militaris CCM_02544 I
CGI_10011802 Crassostrea gigas CGI_10011802 I
IRX3 Dasypus novemcinctus ENSDNOG00000012985 I
DILT_0000254701 Diphyllobothrium latum DILT_0000254701 I
DOTSEDRAFT_78718 Dothistroma septosporum DOTSEDRAFT_78718 I
ECPE_0000388901 Echinostoma caproni ECPE_0000388901 I
D915_04768 Fasciola hepatica D915_04768 I
D915_05481 Fasciola hepatica D915_05481 I
D915_00592 Fasciola hepatica D915_00592 I
FFUJ_12565 Fusarium fujikuroi FFUJ_12565 I
FGRRES_07914 Fusarium graminearum FGRRES_07914 D
FGRRES_17555 Fusarium graminearum FGRRES_17555 I
FOXG_13545 Fusarium oxysporum FOXG_13545 I
irx7 Gasterosteus aculeatus ENSGACG00000011160 I
Gfo_R005354 Geospiza fortis Gfo_R005354 I
Gfo_R014865 Geospiza fortis Gfo_R014865 I
GPLIN_001377400 Globodera pallida GPLIN_001377400 N
HMEL002096 Heliconius melpomene HMEL002096 I
HelroG138488 Helobdella robusta HelroG138488 I
HelroG153600 Helobdella robusta HelroG153600 I
HelroG171177 Helobdella robusta HelroG171177 I
TTAC_0000670801 Hydatigera taeniaeformis TTAC_0000670801 I
HmN_000922600 Hymenolepis microstoma HmN_000922600 I
HmN_000921700 Hymenolepis microstoma HmN_000921700 I
HNAJ_0001179801 Hymenolepis nana HNAJ_0001179801 I
ISCW017111 Ixodes scapularis ISCW017111 I
ENSMEUG00000004557 Macropus eugenii ENSMEUG00000004557 I
ENSMPUG00000007638 Mustela putorius furo ENSMPUG00000007638 I
Myotis_brandtii_Irx1_10035798 Myotis brandtii Myotis_brandtii_Irx1_10035798 I
Ocbimv22006483m.g Octopus bimaculoides Ocbimv22006483m.g I
Ogr18478 Ophisaurus gracilis Ogr18478 I
ENSONIG00000018672 Oreochromis niloticus ENSONIG00000018672 I
ENSOANG00000029378 Ornithorhynchus anatinus ENSOANG00000029378 I
ENSOARG00000016067 Ovis aries ENSOARG00000016067 I
ENSPTRG00000039451 Pan troglodytes ENSPTRG00000039451 I
SNOG_06363 Phaeosphaeria nodorum SNOG_06363 I
ENSPFOG00000013469 Poecilia formosa ENSPFOG00000013469 I
ENSPFOG00000006638 Poecilia formosa ENSPFOG00000006638 I
MKX Procavia capensis ENSPCAG00000014719 I
PXEA_0002454601 Protopolystoma xenopodis PXEA_0002454601 I
PTT_11733 Pyrenophora teres PTT_11733 I
Irx3 Rattus norvegicus ENSRNOG00000011533 I
SSLN_0000846501 Schistocephalus solidus SSLN_0000846501 I
SCUD_0000714801 Schistosoma curassoni SCUD_0000714801 I
A_07284 Schistosoma haematobium A_07284 I
Sjc_0052220 Schistosoma japonicum Sjc_0052220 I
SMRZ_0000148301 Schistosoma margrebowiei SMRZ_0000148301 I
SMTD_0002243001 Schistosoma mattheei SMTD_0002243001 I
SETTUDRAFT_162538 Setosphaeria turcica SETTUDRAFT_162538 I
SPER_0001325101 Spirometra erinaceieuropaei SPER_0001325101 I
SNOG_06363 Stagonospora nodorum SNOG_06363 I
L596_g21727 Steinernema carpocapsae L596_g21727 I
L893_g31416 Steinernema glaseri L893_g31416 I
L898_g17064 Steinernema monticolum L898_g17064 I
L892_g27282 Steinernema scapterisci L892_g27282 I
SMAR002833 Strigamia maritima SMAR002833 I
SMAR007687 Strigamia maritima SMAR007687 I
ENSSSCG00000009724 Sus scrofa ENSSSCG00000009724 I
SMUV_0000063001 Syphacia muris SMUV_0000063001 I
TsM_000760900 Taenia solium TsM_000760900 I
mkxb Takifugu rubripes ENSTRUG00000004166 I
irx7 Takifugu rubripes ENSTRUG00000007926 I
mkxb Tetraodon nigroviridis ENSTNIG00000007881 I
MKX Tupaia belangeri ENSTBEG00000008150 I
Tal_R007088 Tyto alba Tal_R007088 I
ENSXMAG00000006967 Xiphophorus maculatus ENSXMAG00000006967 I
ENSXMAG00000012663 Xiphophorus maculatus ENSXMAG00000012663 I