DILT_0000634101 (Diphyllobothrium latum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 DILT_0000634101 T233658_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Lhx4
M00430_2.00 		Mus musculus
NYAATHN
NDATTRN		 PBM
Berger et al.(2008)
Lhx4_1719 		0.686 0.792
Lhx3
M00435_2.00 		Mus musculus
NNNYAATHW
WDATTRNNN		 PBM
Berger et al.(2008)
Lhx3_3431 		0.686 0.792
Lhx4
M03257_2.00 		Mus musculus
BTAATTRN
NYAATTAV		 SELEX
Jolma et al.(2013)
Lhx4_1 		0.686 0.792
LHX4
M05063_2.00 		Homo sapiens
BYAATYRV
BYRATTRV		 SELEX
Yin et al.(2017)
LHX4_eDBD_HT-SELEX 		0.686 0.792
LHX4
M05066_2.00 		Homo sapiens
BTAATTAN
NTAATTAV		 SELEX
Yin et al.(2017)
LHX4_FL_HT-SELEX 		0.686 0.792
Lhx3
M02687_2.00 		Mus musculus
VRWTAATTAATTW
WAATTAATTAWYB		 SELEX
Mathelier et al.(2014)
MA0135.1 		0.686 0.792
LHX3
M09137_2.00 		Homo sapiens
NYTAATTAAWTHH
DDAWTTAATTARN		 Misc
Kulakovskiy et al.(2013)
LHX3_HUMAN.H11MO.0.C 		0.686 0.792
Lhx3
M09188_2.00 		Mus musculus
NYTRATKRV
BYMATYARN		 Misc
Kulakovskiy et al.(2013)
LHX3_MOUSE.H11MO.0.C 		0.686 0.792
Lhx3
M09570_2.00 		Mus musculus
NNBTAATTAV
BTAATTAVNN		 Misc
Heinz et al.(2010)
Neuron-Lhx3_GSE31456 		0.686 0.792
LHX3
M10657_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LHX3A_01 		0.686 0.792
LHX3
M10658_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LHX3b_01 		0.686 0.792
LHX3
M10659_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LHX3_Q3 		0.686 0.792
LHX4
M05064_2.00 		Homo sapiens
BYAATTRV
BYAATTRV		 SELEX
Yin et al.(2017)
LHX4_eDBD_Methyl-HT-SELEX_1 		0.686 0.792
LHX4
M05065_2.00 		Homo sapiens
NTWAYGHN
NDCRTWAN		 SELEX
Yin et al.(2017)
LHX4_eDBD_Methyl-HT-SELEX_2 		0.686 0.792
LHX4
M05067_2.00 		Homo sapiens
NYAATTRN
NYAATTRN		 SELEX
Yin et al.(2017)
LHX4_FL_Methyl-HT-SELEX_1 		0.686 0.792
LHX4
M05068_2.00 		Homo sapiens
NTAAYGHN
NDCRTTAN		 SELEX
Yin et al.(2017)
LHX4_FL_Methyl-HT-SELEX_2 		0.686 0.792
Lim3
M02116_2.00 		Drosophila melanogaster
NNNNNATBRN
NYVATNNNNN		 PBM
Weirauch et al.(2014)
pTH6478 		0.674 0.774
Lim3
M03796_2.00 		Drosophila melanogaster
BTAATTAV
BTAATTAV		 SELEX
Nitta et al.(2015)
Lim3_1 		0.674 0.774
Lim3
M06492_2.00 		Drosophila melanogaster
HTAATKA
TMATTAD		 B1H
Mathelier et al.(2014)
MA0195.1 		0.674 0.774
Lim3
M06258_2.00 		Drosophila melanogaster
HHTAATKA
TMATTADD		 B1H
Zhu et al.(2011)
Lim3_Cell_FBgn0002023 		0.674 0.774
Lim3
M06259_2.00 		Drosophila melanogaster
HTRATTR
YAATYAD		 B1H
Zhu et al.(2011)
Lim3_SOLEXA_FBgn0002023 		0.674 0.774
C4B866_NEMVE
M02052_2.00 		Nematostella vectensis
NNTTAATTARNN
NNYTAATTAANN		 PBM
Weirauch et al.(2014)
pTH6176 		0.644 0.585
ZFHX2
M02089_2.00 		Homo sapiens
NNTRATYANN
NNTRATYANN		 PBM
Weirauch et al.(2014)
pTH5642 		0.618 0.528
Lhx1
M00405_2.00 		Mus musculus
TRATDRNNN
NNNYHATYA		 PBM
Berger et al.(2008)
Lhx1_2240 		0.613 0.717
Lhx5
M00445_2.00 		Mus musculus
TAATKRNNN
NNNYMATTA		 PBM
Berger et al.(2008)
Lhx5_2279 		0.613 0.717
LHX1
M05410_2.00 		Homo sapiens
NTRATBRN
NYVATYAN		 SELEX
Yin et al.(2017)
LHX1_eDBD_HT-SELEX 		0.613 0.717
LHX5
M04936_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
LHX5_FL_HT-SELEX 		0.613 0.717
LHX1
M05411_2.00 		Homo sapiens
NHRAYGHN
NDCRTYDN		 SELEX
Yin et al.(2017)
LHX1_eDBD_Methyl-HT-SELEX 		0.613 0.717
LHX5
M04937_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
LHX5_FL_Methyl-HT-SELEX_1 		0.613 0.717
LHX5
M04938_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
LHX5_FL_Methyl-HT-SELEX_2 		0.613 0.717
Lim1
M03853_2.00 		Drosophila melanogaster
NTAATTRN
NYAATTAN		 SELEX
Nitta et al.(2015)
Lim1_1 		0.602 0.679
Lim1
M06529_2.00 		Drosophila melanogaster
TTAATTA
TAATTAA		 B1H
Mathelier et al.(2014)
MA0194.1 		0.602 0.679
Lim1
M06332_2.00 		Drosophila melanogaster
TTAATTA
TAATTAA		 B1H
Zhu et al.(2011)
Lim1_Cell_FBgn0026411 		0.602 0.679
Lim1
M06333_2.00 		Drosophila melanogaster
HTAATTR
YAATTAD		 B1H
Zhu et al.(2011)
Lim1_SOLEXA_FBgn0026411 		0.602 0.679
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
DILT_0000634101-mRNA-1 Homeodomain 86 138

Links

Other Homeodomain family TFs
Other Diphyllobothrium latum TFs

544 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_02947 Aegilops tauschii F775_02947 N 0.000
F775_03185 Aegilops tauschii F775_03185 N 0.000
F775_23458 Aegilops tauschii F775_23458 N 0.000
F775_25020 Aegilops tauschii F775_25020 N 0.000
F775_43492 Aegilops tauschii F775_43492 N 0.000
AMTR_s00024p00250370 Amborella trichopoda AMTR_s00024p00250370 N 0.000
Aquca_041_00164 Aquilegia coerulea Aquca_041_00164 N 0.000
RSL1 Arabidopsis lyrata fgenesh2_kg.7__3192__AT5G37800.1 N 0.000
RHD6 Arabidopsis lyrata scaffold_201372.1 N 0.000
BHLH83 Arabidopsis thaliana AT1G66470 N 0.000
BHLH86 Arabidopsis thaliana AT5G37800 N 0.000
Bostr.26959s0271 Boechera stricta Bostr.26959s0271 N 0.000
Bostr.9638s0100 Boechera stricta Bostr.9638s0100 N 0.000
BRADI1G42440 Brachypodium distachyon BRADI1G42440 N 0.000
BRADI2G01000 Brachypodium distachyon BRADI2G01000 N 0.000
BRADI3G53060 Brachypodium distachyon BRADI3G53060 N 0.000
Bo00835s050 Brassica oleracea Bo00835s050 N 0.000
Bo6g101000 Brassica oleracea Bo6g101000 N 0.000
Bra019708 Brassica rapa Bra019708 N 0.000
Cagra.2629s0001 Capsella grandiflora Cagra.2629s0001 N 0.000
Cagra.8123s0001 Capsella grandiflora Cagra.8123s0001 N 0.000
Carubv10007389m.g Capsella rubella Carubv10007389m.g N 0.000
Carubv10021322m.g Capsella rubella Carubv10021322m.g N 0.000
evm.TU.contig_27490 Carica papaya evm.TU.contig_27490 N 0.000
Ca_16136 Cicer arietinum Ca_16136 N 0.000
Cla020067 Citrullus lanatus Cla020067 N 0.000
Ciclev10013420m.g Citrus clementina Ciclev10013420m.g N 0.000
orange1.1g038918m.g Citrus sinensis orange1.1g038918m.g N 0.000
Cucsa.006340 Cucumis sativus Cucsa.006340 N 0.000
Eucgr.F02831 Eucalyptus grandis Eucgr.F02831 N 0.000
Thhalv10018927m.g Eutrema salsugineum Thhalv10018927m.g N 0.000
Thhalv10028239m.g Eutrema salsugineum Thhalv10028239m.g N 0.000
gene17937-v1.0-hybrid Fragaria vesca gene17937-v1.0-hybrid N 0.000
GLYMA11G33840 Glycine max GLYMA11G33840 N 0.000
GLYMA14G07590 Glycine max GLYMA14G07590 N 0.000
GLYMA18G04420 Glycine max GLYMA18G04420 N 0.000
Gorai.001G086800 Gossypium raimondii Gorai.001G086800 N 0.000
Gorai.004G064400 Gossypium raimondii Gorai.004G064400 N 0.000
MLOC_37511 Hordeum vulgare MLOC_37511 N 0.000
LPERR01G00690 Leersia perrieri LPERR01G00690 N 0.000
LPERR02G24230 Leersia perrieri LPERR02G24230 N 0.000
Lus10017634.g Linum usitatissimum Lus10017634.g N 0.000
Lus10033592.g Linum usitatissimum Lus10033592.g N 0.000
MDP0000435722 Malus domestica MDP0000435722 N 0.000
cassava10199.m1 Manihot esculenta cassava10199.m1 N 0.000
MTR_5g079500 Medicago truncatula MTR_5g079500 N 0.000
mgf025678m Mimulus guttatus mgf025678m N 0.000
GSMUA_Achr10G20230_001 Musa acuminata GSMUA_Achr10G20230_001 N 0.000
GSMUA_Achr2G22860_001 Musa acuminata GSMUA_Achr2G22860_001 N 0.000
GSMUA_Achr3G01250_001 Musa acuminata GSMUA_Achr3G01250_001 N 0.000
GSMUA_Achr6G09370_001 Musa acuminata GSMUA_Achr6G09370_001 N 0.000
OBART01G00850 Oryza barthii OBART01G00850 N 0.000
OBART02G29800 Oryza barthii OBART02G29800 N 0.000
OB0081G10010 Oryza brachyantha OB0081G10010 N 0.000
OB01G10850 Oryza brachyantha OB01G10850 N 0.000
OB02G36990 Oryza brachyantha OB02G36990 N 0.000
ORGLA01G0007400 Oryza glaberrima ORGLA01G0007400 N 0.000
ORGLA02G0253300 Oryza glaberrima ORGLA02G0253300 N 0.000
OGLUM01G00830 Oryza glumaepatula OGLUM01G00830 N 0.000
OGLUM02G30450 Oryza glumaepatula OGLUM02G30450 N 0.000
BGIOSGA002533 Oryza indica BGIOSGA002533 N 0.000
BGIOSGA008903 Oryza indica BGIOSGA008903 N 0.000
OLONG_010619 Oryza longistaminata OLONG_010619 N 0.000
OMERI01G00290 Oryza meridionalis OMERI01G00290 N 0.000
OMERI02G28660 Oryza meridionalis OMERI02G28660 N 0.000
ONIVA01G00780 Oryza nivara ONIVA01G00780 N 0.000
ONIVA02G32560 Oryza nivara ONIVA02G32560 N 0.000
OPUNC01G00700 Oryza punctata OPUNC01G00700 N 0.000
OPUNC02G27370 Oryza punctata OPUNC02G27370 N 0.000
ORUFI01G00830 Oryza rufipogon ORUFI01G00830 N 0.000
ORUFI02G31420 Oryza rufipogon ORUFI02G31420 N 0.000
OS01G0111500 Oryza sativa OS01G0111500 N 0.000
OS02G0710300 Oryza sativa OS02G0710300 N 0.000
Pavir.Aa00611 Panicum virgatum Pavir.Aa00611 N 0.000
Pavir.Db01008 Panicum virgatum Pavir.Db01008 N 0.000
Pavir.Eb00817 Panicum virgatum Pavir.Eb00817 N 0.000
Pavir.J04215 Panicum virgatum Pavir.J04215 N 0.000
Pavir.J20533 Panicum virgatum Pavir.J20533 N 0.000
estExt_fgenesh1_pg.C_1470079 Physcomitrella patens estExt_fgenesh1_pg.C_1470079 N 0.000
estExt_fgenesh1_pg.C_840011 Physcomitrella patens estExt_fgenesh1_pg.C_840011 N 0.000
POPTR_0004s08770 Populus trichocarpa POPTR_0004s08770 N 0.000
POPTR_0005s14360 Populus trichocarpa POPTR_0005s14360 N 0.000
Pm014359 Prunus mume Pm014359 N 0.000
PRUPE_ppa025775mg Prunus persica PRUPE_ppa025775mg N 0.000
28609.m000209 Ricinus communis 28609.m000209 N 0.000
SapurV1A.0102s0280 Salix purpurea SapurV1A.0102s0280 N 0.000
SapurV1A.0230s0340 Salix purpurea SapurV1A.0230s0340 N 0.000
SELMODRAFT_409967 Selaginella moellendorffii SELMODRAFT_409967 N 0.000
SELMODRAFT_413232 Selaginella moellendorffii SELMODRAFT_413232 N 0.000
SELMODRAFT_414414 Selaginella moellendorffii SELMODRAFT_414414 N 0.000
SELMODRAFT_418491 Selaginella moellendorffii SELMODRAFT_418491 N 0.000
SELMODRAFT_423809 Selaginella moellendorffii SELMODRAFT_423809 N 0.000
SELMODRAFT_426794 Selaginella moellendorffii SELMODRAFT_426794 N 0.000
Si004720m.g Setaria italica Si004720m.g N 0.000
Si019575m.g Setaria italica Si019575m.g N 0.000
Solyc02g091440.1 Solanum lycopersicum Solyc02g091440.1 N 0.000
PGSC0003DMG400030650 Solanum tuberosum PGSC0003DMG400030650 N 0.000
Sb03g008290 Sorghum bicolor Sb03g008290 N 0.000
Sb04g030230 Sorghum bicolor Sb04g030230 N 0.000
TCM_019210 Theobroma cacao TCM_019210 N 0.000
Traes_3AS_0D78930B4 Triticum aestivum Traes_3AS_0D78930B4 N 0.000
TRAES3BF060500180CFD_g Triticum aestivum TRAES3BF060500180CFD_g N 0.000
Traes_6BL_9B25E6A10 Triticum aestivum Traes_6BL_9B25E6A10 N 0.000
Traes_6BL_A964BE52B Triticum aestivum Traes_6BL_A964BE52B N 0.000
Traes_6DL_3DCFAB31F Triticum aestivum Traes_6DL_3DCFAB31F N 0.000
Traes_7BS_A0A8B25DF Triticum aestivum Traes_7BS_A0A8B25DF N 0.000
Traes_7DS_4053B6E88 Triticum aestivum Traes_7DS_4053B6E88 N 0.000
TRIUR3_11692 Triticum urartu TRIUR3_11692 N 0.000
TRIUR3_14379 Triticum urartu TRIUR3_14379 N 0.000
TRIUR3_27166 Triticum urartu TRIUR3_27166 N 0.000
VIT_14s0006g01470 Vitis vinifera VIT_14s0006g01470 N 0.000
AC216731.3_FG001 Zea mays AC216731.3_FG001 N 0.000
GRMZM2G066057 Zea mays GRMZM2G066057 N 0.000