SMUV_0000918401 (Syphacia muris)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 SMUV_0000918401 T236218_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
pal-1
M02183_2.00 		Caenorhabditis elegans
GYAATWAA
TTWATTRC		 PBM
Weirauch et al.(2014)
pTH6016 		0.631 0.717
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMUV_0000918401-mRNA-1 Homeodomain 199 251

Links

Other Homeodomain family TFs
Other Syphacia muris TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g01517 Acanthocheilonema viteae nAv.1.0.1.g01517 I 0.749
ANCCAN_03696 Ancylostoma caninum ANCCAN_03696 I 0.725
ACAC_0001014401 Angiostrongylus cantonensis ACAC_0001014401 N 0.600
ACOC_0000988901 Angiostrongylus costaricensis ACOC_0000988901 N 0.600
ASIM_0001558001 Anisakis simplex ASIM_0001558001 I 0.759
ALUE_0000232801 Ascaris lumbricoides ALUE_0000232801 I 0.759
ASU_04180 Ascaris suum ASU_04180 I 0.664
Bm2663 Brugia malayi Bm2663 I 0.664
BTMF_0001276401 Brugia timori BTMF_0001276401 I 0.749
CBN10543 Caenorhabditis brenneri CBN10543 I 0.631
CBG17980 Caenorhabditis briggsae CBG17980 I 0.631
pal-1 Caenorhabditis elegans WBGene00003912 D 0.631
CJA02391 Caenorhabditis japonica CJA02391 I 0.640
CRE20227 Caenorhabditis remanei CRE20227 I 0.631
DICVIV_02748 Dictyocaulus viviparus DICVIV_02748 N 0.600
nDi.2.2.2.g06197 Dirofilaria immitis nDi.2.2.2.g06197 I 0.676
EEL_0000223001 Elaeophora elaphi EEL_0000223001 I 0.664
EVEC_0000579401 Enterobius vermicularis EVEC_0000579401 I 0.776
HCOI01745700 Haemonchus contortus HCOI01745700 I 0.630
HPLM_0000060301 Haemonchus placei HPLM_0000060301 I 0.725
HPBE_0001563701 Heligmosomoides bakeri HPBE_0001563701 I 0.725
nLs.2.1.2.g09719 Litomosoides sigmodontis nLs.2.1.2.g09719 I 0.759
LOAG_15485 Loa loa LOAG_15485 I 0.759
ENSMODG00000025439 Monodelphis domestica ENSMODG00000025439 I 0.658
NECAME_06333 Necator americanus NECAME_06333 I 0.725
NBR_0000825001 Nippostrongylus brasiliensis NBR_0000825001 I 0.725
OESDEN_19696 Oesophagostomum dentatum OESDEN_19696 I 0.725
OESDEN_25610 Oesophagostomum dentatum OESDEN_25610 N 0.600
OFLC_0000632501 Onchocerca flexuosa OFLC_0000632501 I 0.762
WBGene00246390 Onchocerca volvulus WBGene00246390 I 0.676
PEQ_0000241601 Parascaris equorum PEQ_0000241601 N 0.602
PTRK_0001336600 Parastrongyloides trichosuri PTRK_0001336600 I 0.623
Ppa-pal-1 Pristionchus pacificus PPA02358 I 0.726
RSKR_0001046900 Rhabditophanes kr3021 RSKR_0001046900 I 0.619
SPAL_0001492700 Strongyloides papillosus SPAL_0001492700 I 0.632
SSTP_0000576200 Strongyloides stercoralis SSTP_0000576200 I 0.632
SVE_0397300 Strongyloides venezuelensis SVE_0397300 I 0.632
SVUK_0001504901 Strongylus vulgaris SVUK_0001504901 I 0.725
TCLT_0000255601 Thelazia callipaeda TCLT_0000255601 I 0.702
TCNE_0000481301 Toxocara canis TCNE_0000481301 N 0.602
TCNE_0001280701 Toxocara canis TCNE_0001280701 I 0.749
EFV58119 Trichinella spiralis EFV58119 I 0.650
WUBG_02562 Wuchereria bancrofti WUBG_02562 I 0.749