SSTP_0000577700 (Strongyloides stercoralis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 SSTP_0000577700 T236493_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Six4
M00461_2.00 		Mus musculus
NNKABMHNN
NNDKVTMNN		 PBM
Berger et al.(2008)
Six4_2860 		0.805 0.585
SIX4
M04939_2.00 		Homo sapiens
NVYGATACVB
VBGTATCRBN		 SELEX
Yin et al.(2017)
SIX4_eDBD_HT-SELEX 		0.805 0.585
Six4
M09198_2.00 		Mus musculus
DGDAABHNSASNNN
NNNSTSNDVTTHCH		 Misc
Kulakovskiy et al.(2013)
SIX4_MOUSE.H11MO.0.C 		0.805 0.585
SIX4
M10646_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX4_Q3 		0.805 0.585
SIX4
M04940_2.00 		Homo sapiens
NBGTAWCRHN
NDYGWTACVN		 SELEX
Yin et al.(2017)
SIX4_eDBD_Methyl-HT-SELEX 		0.805 0.585
Six4
M00563_2.00 		Drosophila melanogaster
NNDANMHNN
NNDKNTHNN		 PBM
Busser et al.(2012a)
Six4 		0.792 0.585
Six4
M06530_2.00 		Drosophila melanogaster
TGABAC
GTVTCA		 B1H
Mathelier et al.(2014)
MA0204.1 		0.792 0.585
Six4
M06334_2.00 		Drosophila melanogaster
WDDTGABAC
GTVTCAHHW		 B1H
Zhu et al.(2011)
Six4_Cell_FBgn0027364 		0.792 0.585
Six4
M06335_2.00 		Drosophila melanogaster
NTGAKACB
VGTMTCAN		 B1H
Zhu et al.(2011)
Six4_SOLEXA_2_FBgn0027364 		0.792 0.585
Six4
M06336_2.00 		Drosophila melanogaster
NNNTGABA
TVTCANNN		 B1H
Zhu et al.(2011)
Six4_SOLEXA_FBgn0027364 		0.792 0.585
SIX5
M08208_2.00 		Homo sapiens
GARWTGTAGT
ACTACAWYTC		 ChIP-seq
Contrino et al.(2012)
Mv121 		0.792 0.566
SIX5
M08209_2.00 		Homo sapiens
GGAGTTGT
ACAACTCC		 ChIP-seq
Contrino et al.(2012)
Mv123 		0.792 0.566
SIX5
M10738_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX5_01 		0.792 0.566
SIX5
M10739_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX5_02 		0.792 0.566
so
M02117_2.00 		Drosophila melanogaster
NDATMYNNN
NNNRKATHN		 PBM
Weirauch et al.(2014)
pTH5690 		0.679 0.585
so
M03800_2.00 		Drosophila melanogaster
NYGATAYB
VRTATCRN		 SELEX
Nitta et al.(2015)
so_1 		0.679 0.585
so
M03801_2.00 		Drosophila melanogaster
YKATAYNNNYGATAY
RTATCRNNNRTATMR		 SELEX
Nitta et al.(2015)
so_2 		0.679 0.585
so
M03802_2.00 		Drosophila melanogaster
YGATACGTATCR
YGATACGTATCR		 SELEX
Nitta et al.(2015)
so_3 		0.679 0.585
so
M03803_2.00 		Drosophila melanogaster
RTATCRYGATAC
GTATCRYGATAY		 SELEX
Nitta et al.(2015)
so_4 		0.679 0.585
so
M06497_2.00 		Drosophila melanogaster
TGATAC
GTATCA		 B1H
Mathelier et al.(2014)
MA0246.1 		0.679 0.585
so
M06268_2.00 		Drosophila melanogaster
NRTGATA
TATCAYN		 B1H
Zhu et al.(2011)
So_Cell_FBgn0003460 		0.679 0.585
so
M06269_2.00 		Drosophila melanogaster
NNNTGATA
TATCANNN		 B1H
Zhu et al.(2011)
So_SOLEXA_FBgn0003460 		0.679 0.585
Six2
M00425_2.00 		Mus musculus
NNAYMYNN
NNRKRTNN		 PBM
Berger et al.(2008)
Six2_2307 		0.679 0.566
Six1
M00512_2.00 		Mus musculus
NNDATMYNNN
NNNRKATHNN		 PBM
Berger et al.(2008)
Six1_0935 		0.679 0.566
SIX1
M05094_2.00 		Homo sapiens
NNYGATACVB
VBGTATCRNN		 SELEX
Yin et al.(2017)
SIX1_eDBD_HT-SELEX 		0.679 0.566
SIX1
M05096_2.00 		Homo sapiens
NNYGATAYVB
VBRTATCRNN		 SELEX
Yin et al.(2017)
SIX1_FL_HT-SELEX 		0.679 0.566
SIX2
M05285_2.00 		Homo sapiens
NNYGATACSB
VSGTATCRNN		 SELEX
Yin et al.(2017)
SIX2_eDBD_HT-SELEX 		0.679 0.566
SIX2
M05287_2.00 		Homo sapiens
NSGTRWCRYN
NRYGWYACSN		 SELEX
Yin et al.(2017)
SIX2_FL_HT-SELEX 		0.679 0.566
SIX1
M08130_2.00 		Homo sapiens
GWAACCTGANM
KNTCAGGTTWC		 ChIP-seq
Mathelier et al.(2014)
MA1118.1 		0.679 0.566
SIX2
M08133_2.00 		Homo sapiens
NNNTGWAACCTGAKMH
DKMTCAGGTTWCANNN		 ChIP-seq
Mathelier et al.(2014)
MA1119.1 		0.679 0.566
SIX1
M09142_2.00 		Homo sapiens
DGWAAYHTGABMYN
NRKVTCADRTTWCH		 Misc
Kulakovskiy et al.(2013)
SIX1_HUMAN.H11MO.0.A 		0.679 0.566
SIX2
M09157_2.00 		Homo sapiens
DGWAAYHHGABMH
DKVTCDDRTTWCH		 Misc
Kulakovskiy et al.(2013)
SIX2_HUMAN.H11MO.0.A 		0.679 0.566
Six2
M09185_2.00 		Mus musculus
DGWAAYHYRABMYB
VRKVTYRDRTTWCH		 Misc
Kulakovskiy et al.(2013)
SIX2_MOUSE.H11MO.0.A 		0.679 0.566
Six1
M09579_2.00 		Mus musculus
GWAAYHTGABMH
DKVTCADRTTWC		 Misc
Heinz et al.(2010)
Myoblast-Six1_GSE20150 		0.679 0.566
SIX1
M10684_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX1_Q3_01 		0.679 0.566
SIX1
M10685_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX1_Q3 		0.679 0.566
SIX1
M05095_2.00 		Homo sapiens
NNYGATABNB
VNVTATCRNN		 SELEX
Yin et al.(2017)
SIX1_eDBD_Methyl-HT-SELEX 		0.679 0.566
SIX1
M05097_2.00 		Homo sapiens
NNYGATAYSB
VSRTATCRNN		 SELEX
Yin et al.(2017)
SIX1_FL_Methyl-HT-SELEX 		0.679 0.566
SIX2
M05286_2.00 		Homo sapiens
NBRTATCRNN
NNYGATAYVN		 SELEX
Yin et al.(2017)
SIX2_eDBD_Methyl-HT-SELEX 		0.679 0.566
SIX2
M05288_2.00 		Homo sapiens
VBRTAWCRNN
NNYGWTAYVB		 SELEX
Yin et al.(2017)
SIX2_FL_Methyl-HT-SELEX 		0.679 0.566
ceh-34
M00672_2.00 		Caenorhabditis elegans
NNNRDAWNNN
NNNWTHYNNN		 PBM
Narasimhan et al.(2015)
pTH9708 		0.619 0.509
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SSTP_0000577700.1 Homeodomain 142 194

Links

Other Homeodomain family TFs
Other Strongyloides stercoralis TFs

539 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAPLG00000010204 Anas platyrhynchos ENSAPLG00000010204 N
AALB009867 Anopheles albimanus AALB009867 N
ACOM022799 Anopheles coluzzii ACOM022799 N
ACUA010594 Anopheles culicifacies ACUA010594 N
ADIR005631 Anopheles dirus ADIR005631 N
AEPI003629 Anopheles epiroticus AEPI003629 N
AFUN010198 Anopheles funestus AFUN010198 N
AMEC000538 Anopheles melas AMEC000538 I
AMEM007694 Anopheles merus AMEM007694 N
AMIN009302 Anopheles minimus AMIN009302 N
AQUA001261 Anopheles quadriannulatus AQUA001261 N
ASTEI06408 Anopheles stephensi ASTEI06408 N
GB40963 Apis mellifera GB40963 N
Afo_R012670 Aptenodytes forsteri Afo_R012670 N
ALUE_0000245701 Ascaris lumbricoides ALUE_0000245701 N
ALUE_0000639901 Ascaris lumbricoides ALUE_0000639901 N
ACEP10857 Atta cephalotes ACEP10857 N
BGIBMGA003081 Bombyx mori BGIBMGA003081 N
ENSBTAP00000027633-D1 Bos grunniens ENSBTAP00000027633-D1 I
Brh_R004116 Buceros rhinoceros Brh_R004116 N
sox-2 Caenorhabditis elegans WBGene00004949 I
SOX18 Callithrix jacchus ENSCJAG00000022379 N
ENSCSAG00000016751 Chlorocebus sabaeus ENSCSAG00000016751 N
CLEC006960 Cimex lectularius CLEC006960 N
CpipJ_CPIJ012041 Culex pipiens CpipJ_CPIJ012041 N
CPIJ012041 Culex quinquefasciatus CPIJ012041 N
SOX18 Dasypus novemcinctus ENSDNOG00000036237 N
YQE_08562 Dendroctonus ponderosae YQE_08562 N
SOX8 Equus caballus ENSECAG00000016320 I
SOX2 Felis catus ENSFCAG00000029205 I
GPLIN_000970900 Globodera pallida GPLIN_000970900 N
GPUH_0000499601 Gongylonema pulchrum GPUH_0000499601 N
HHAL001293-PA Halyomorpha halys HHAL001293-PA N
HHAL001583-PA Halyomorpha halys HHAL001583-PA N
Hsal_04827--XP_001122993.1_APIME Harpegnathos saltator Hsal_04827--XP_001122993.1_APIME N
Hba_21281 Heterorhabditis bacteriophora Hba_21281 N
HYDPIDRAFT_51400 Hydnomerulius pinastri HYDPIDRAFT_51400 N
ENSSTOG00000011011 Ictidomys tridecemlineatus ENSSTOG00000011011 I
ENSLOCG00000011834 Lepisosteus oculatus ENSLOCG00000011834 I
LDEC007550 Leptinotarsa decemlineata LDEC007550 N
LDEC017494 Leptinotarsa decemlineata LDEC017494 N
LDEC019307 Leptinotarsa decemlineata LDEC019307 N
LCUP001586 Lucilia cuprina LCUP001586 N
ENSP00000322568 Macaca fascicularis ENSP00000322568 I
MESCA012239 Megaselia scalaris MESCA012239 I
ENSMGAG00000006624 Meleagris gallopavo ENSMGAG00000006624 N
Sox17 Mus musculus ENSMUSG00000025902 D
Myotis_brandtii_SOX2_10019709 Myotis brandtii Myotis_brandtii_SOX2_10019709 I
Ogr08337 Ophisaurus gracilis Ogr08337 N
Ogr11176 Ophisaurus gracilis Ogr11176 N
ENSOANG00000002448 Ornithorhynchus anatinus ENSOANG00000002448 I
ENSOANG00000011188 Ornithorhynchus anatinus ENSOANG00000011188 I
ENSOARG00000000906 Ovis aries ENSOARG00000000906 I
SOX18 Pan troglodytes ENSPTRG00000030459 I
ENSPANG00000005859 Papio anubis ENSPANG00000005859 I
SOX18 Procavia capensis ENSPCAG00000015663 N
SOX2 Procavia capensis ENSPCAG00000003690 I
RPRC001038 Rhodnius prolixus RPRC001038 N
SMU15030186 Schmidtea mediterranea SMU15030186 N
SINV19749 Solenopsis invicta SINV19749 N
SOX17 Sorex araneus ENSSARG00000009573 I
D918_08317 Trichuris suis D918_08317 N
ENSTTRG00000015548 Tursiops truncatus ENSTTRG00000015548 I
WALSEDRAFT_59420 Wallemia sebi WALSEDRAFT_59420 N
L798_12046 Zootermopsis nevadensis L798_12046 N