CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CpipJ_CPIJ012041
(
Culex pipiens
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
CpipJ_CPIJ012041
T326052_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CpipJ_CPIJ012041-RA
Sox
2
38
EVARAEWKLLTEDEKRPFIDEAKRLRAMHMKEHPDYK
Links
Other
Sox
family TFs
Other
Culex pipiens
TFs
223 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CPIJ012041
Culex quinquefasciatus
CPIJ012041
N
0.741
LDEC017494
Leptinotarsa decemlineata
LDEC017494
N
0.741
ACOM022799
Anopheles coluzzii
ACOM022799
N
0.741
AQUA001261
Anopheles quadriannulatus
AQUA001261
N
0.741
BGIBMGA003081
Bombyx mori
BGIBMGA003081
N
0.735
L798_12046
Zootermopsis nevadensis
L798_12046
N
0.735
CLEC006960
Cimex lectularius
CLEC006960
N
0.735
AALB009867
Anopheles albimanus
AALB009867
N
0.735
ACUA010594
Anopheles culicifacies
ACUA010594
N
0.735
AEPI003629
Anopheles epiroticus
AEPI003629
N
0.735
AFUN010198
Anopheles funestus
AFUN010198
N
0.735
AMIN009302
Anopheles minimus
AMIN009302
N
0.735
ALUE_0000639901
Ascaris lumbricoides
ALUE_0000639901
N
0.707
ENSOANG00000011188
Ornithorhynchus anatinus
ENSOANG00000011188
I
0.701
ALUE_0000245701
Ascaris lumbricoides
ALUE_0000245701
N
0.701
Sox17
Mus musculus
ENSMUSG00000025902
D
0.690
SOX17
Sorex araneus
ENSSARG00000009573
I
0.690
ENSBTAP00000027633-D1
Bos grunniens
ENSBTAP00000027633-D1
I
0.689
Ogr11176
Ophisaurus gracilis
Ogr11176
N
0.687
ENSAPLG00000010204
Anas platyrhynchos
ENSAPLG00000010204
N
0.683
ENSCSAG00000016751
Chlorocebus sabaeus
ENSCSAG00000016751
N
0.683
SOX18
Dasypus novemcinctus
ENSDNOG00000036237
N
0.683
ENSMGAG00000006624
Meleagris gallopavo
ENSMGAG00000006624
N
0.683
SOX18
Procavia capensis
ENSPCAG00000015663
N
0.683
SOX18
Pan troglodytes
ENSPTRG00000030459
I
0.683
ENSTTRG00000015548
Tursiops truncatus
ENSTTRG00000015548
I
0.680
ENSAMXG00000017231
Astyanax mexicanus
ENSAMXG00000017231
I
0.674
ADIR005631
Anopheles dirus
ADIR005631
N
0.659
ASTEI06408
Anopheles stephensi
ASTEI06408
N
0.659
TC009856
Tribolium castaneum
TC009856
N
0.658
AMAM023617
Anopheles maculatus
AMAM023617
N
0.658
PHUM433280
Pediculus humanus
PHUM433280
N
0.654
AAEL000771
Aedes aegypti
AAEL000771
N
0.652
AGAP028091
Anopheles gambiae
AGAP028091
N
0.652
ENSTSYG00000001164
Tarsius syrichta
ENSTSYG00000001164
I
0.652
SINV16572
Solenopsis invicta
SINV16572
N
0.652
ACUA012732
Anopheles culicifacies
ACUA012732
N
0.652
AEPI007948
Anopheles epiroticus
AEPI007948
N
0.652
AFUN009317
Anopheles funestus
AFUN009317
N
0.652
AMEC011653
Anopheles melas
AMEC011653
N
0.652
AMEM002834
Anopheles merus
AMEM002834
N
0.652
ASTEI06131
Anopheles stephensi
ASTEI06131
N
0.652
L898_g4879
Steinernema monticolum
L898_g4879
N
0.652
sox9a
Tetraodon nigroviridis
ENSTNIG00000001901
N
0.649
SMAR007058
Strigamia maritima
SMAR007058
N
0.645
ENSAPLG00000003216
Anas platyrhynchos
ENSAPLG00000003216
N
0.643
ENSAPLG00000013168
Anas platyrhynchos
ENSAPLG00000013168
I
0.643
SOX8
Callithrix jacchus
ENSCJAG00000002684
I
0.643
SOX10
Echinops telfairi
ENSETEG00000012633
I
0.643
SOX8
Echinops telfairi
ENSETEG00000015470
N
0.643
SOX9
Echinops telfairi
ENSETEG00000020237
I
0.643
SOX8
Felis catus
ENSFCAG00000004219
N
0.643
ENSFCAG00000015685
Felis catus
ENSFCAG00000015685
I
0.643
SOX8
Microcebus murinus
ENSMICG00000011516
I
0.643
SOX9
Myotis lucifugus
ENSMLUG00000030312
I
0.643
ENSSHAG00000008406
Sarcophilus harrisii
ENSSHAG00000008406
I
0.643
SOX9
Tupaia belangeri
ENSTBEG00000000175
N
0.643
ENSTSYG00000006321
Tarsius syrichta
ENSTSYG00000006321
I
0.643
Afo_R012388
Aptenodytes forsteri
Afo_R012388
N
0.643
Cmyd_10006594
Chelonia mydas
Cmyd_10006594
N
0.643
ENSP00000409273
Macaca fascicularis
ENSP00000409273
I
0.643
Ogr00751
Ophisaurus gracilis
Ogr00751
I
0.643
AMEM007694
Anopheles merus
AMEM007694
N
0.641
YQE_03817
Dendroctonus ponderosae
YQE_03817
N
0.637
LDEC018263
Leptinotarsa decemlineata
LDEC018263
N
0.637
ISCW001638
Ixodes scapularis
ISCW001638
N
0.634
HHAL000218-PA
Halyomorpha halys
HHAL000218-PA
N
0.634
AEPI007652
Anopheles epiroticus
AEPI007652
N
0.631
ACUA008827
Anopheles culicifacies
ACUA008827
N
0.628
AFUN006689
Anopheles funestus
AFUN006689
N
0.628
AMAM004028
Anopheles maculatus
AMAM004028
N
0.628
AMIN001220
Anopheles minimus
AMIN001220
N
0.628
SOX2
Felis catus
ENSFCAG00000029205
I
0.625
SOX2
Procavia capensis
ENSPCAG00000003690
I
0.625
LotgiG143673
Lottia gigantea
LotgiG143673
N
0.625
DAPPUDRAFT_113704
Daphnia pulex
DAPPUDRAFT_113704
N
0.624
YQE_08562
Dendroctonus ponderosae
YQE_08562
N
0.624
PEQ_0000549401
Parascaris equorum
PEQ_0000549401
N
0.623
CpipJ_CPIJ014017
Culex pipiens
CpipJ_CPIJ014017
N
0.622
CPIJ014017
Culex quinquefasciatus
CPIJ014017
N
0.622
L798_00185
Zootermopsis nevadensis
L798_00185
N
0.622
AATE016483
Anopheles atroparvus
AATE016483
N
0.622
AMEC007393
Anopheles melas
AMEC007393
N
0.622
MPER_06248
Moniliophthora perniciosa
MPER_06248
N
0.619
SINV19749
Solenopsis invicta
SINV19749
N
0.619
PredSwiss_ASS2010_3779.1
Pneumocystis carinii
PredSwiss_ASS2010_3779.1
N
0.619
PredSwiss_CON1835.1
Pneumocystis carinii
PredSwiss_CON1835.1
N
0.619
HMEL013676
Heliconius melpomene
HMEL013676
N
0.617
GPUH_0000499601
Gongylonema pulchrum
GPUH_0000499601
N
0.615
ENSOANG00000002448
Ornithorhynchus anatinus
ENSOANG00000002448
I
0.604
HHAL001293-PA
Halyomorpha halys
HHAL001293-PA
N
0.603
ANCDUO_13942
Ancylostoma duodenale
ANCDUO_13942
N
0.599
OESDEN_19415
Oesophagostomum dentatum
OESDEN_19415
N
0.592
67303
Aureococcus anophagefferens
67303
N
0.590
ADIR009661
Anopheles dirus
ADIR009661
N
0.583
MESCA006364
Megaselia scalaris
MESCA006364
N
0.581
Afo_R012670
Aptenodytes forsteri
Afo_R012670
N
0.579
Hmg20b
Mus musculus
ENSMUSG00000020232
D
0.577
ACEP25851
Atta cephalotes
ACEP25851
N
0.576
AALB009772
Anopheles albimanus
AALB009772
N
0.576
AATE015714
Anopheles atroparvus
AATE015714
N
0.576
ACOM026653
Anopheles coluzzii
ACOM026653
N
0.576
AQUA005880
Anopheles quadriannulatus
AQUA005880
N
0.576
Myotis_brandtii_Hmgb2_10029741
Myotis brandtii
Myotis_brandtii_Hmgb2_10029741
N
0.569
Myotis_brandtii_TIMM8A_10019481
Myotis brandtii
Myotis_brandtii_TIMM8A_10019481
N
0.569
BGLB010902
Biomphalaria glabrata
BGLB010902
N
0.567
HmN_000301900
Hymenolepis microstoma
HmN_000301900
N
0.567
HHAL001583-PA
Halyomorpha halys
HHAL001583-PA
N
0.562
DDB_G0287073
Dictyostelium discoideum
DDB_G0287073
N
0.560
CpipJ_CPIJ012498
Culex pipiens
CpipJ_CPIJ012498
N
0.558
CPIJ012498
Culex quinquefasciatus
CPIJ012498
N
0.558
YQE_13041
Dendroctonus ponderosae
YQE_13041
N
0.558
ASIS001889
Anopheles sinensis
ASIS001889
N
0.558
HelroG68905
Helobdella robusta
HelroG68905
N
0.557
Minc18937
Meloidogyne incognita
Minc18937
N
0.556
GLOINDRAFT_335861
Rhizophagus irregularis
GLOINDRAFT_335861
N
0.554
estExt_fgeneshDP_kg.C_1020010
Dictyostelium purpureum
estExt_fgeneshDP_kg.C_1020010
N
0.554
L798_05432
Zootermopsis nevadensis
L798_05432
N
0.552
RPRC001038
Rhodnius prolixus
RPRC001038
N
0.552
LCUP001586
Lucilia cuprina
LCUP001586
N
0.552
M422DRAFT_54734
Sphaerobolus stellatus
M422DRAFT_54734
N
0.551
SMAR010125
Strigamia maritima
SMAR010125
N
0.551
ENSPMAG00000004519
Petromyzon marinus
ENSPMAG00000004519
N
0.550
Ogr13852
Ophisaurus gracilis
Ogr13852
N
0.550
PPAI005428
Phlebotomus papatasi
PPAI005428
N
0.548
F443_09320
Phytophthora parasitica
F443_09320
N
0.547
MESCA012239
Megaselia scalaris
MESCA012239
I
0.545
JL09_g5343
Pichia kudriavzevii
JL09_g5343
N
0.544
TcIL3000.10.440
Trypanosoma congolense
TcIL3000.10.440
N
0.540
ENSNLEG00000002693
Nomascus leucogenys
ENSNLEG00000002693
N
0.539
fgenesh_scip_prom.28083.3150
Phytophthora lateralis
fgenesh_scip_prom.28083.3150
N
0.539
Physo127875
Phytophthora sojae
Physo127875
N
0.539
fgenesh1_pm.C_scaffold_23000166
Phytophthora capsici
fgenesh1_pm.C_scaffold_23000166
N
0.539
Ogr08337
Ophisaurus gracilis
Ogr08337
N
0.538
Gorai.005G106800
Gossypium raimondii
Gorai.005G106800
N
0.538
ENSFALG00000011068
Ficedula albicollis
ENSFALG00000011068
N
0.536
ENSPSIG00000016857
Pelodiscus sinensis
ENSPSIG00000016857
N
0.536
Aan_R006397
Calypte anna
Aan_R006397
N
0.536
Gfo_R008143
Geospiza fortis
Gfo_R008143
N
0.536
Phyra76615
Phytophthora ramorum
Phyra76615
N
0.532
M404DRAFT_787968
Pisolithus tinctorius
M404DRAFT_787968
N
0.531
WALSEDRAFT_59420
Wallemia sebi
WALSEDRAFT_59420
N
0.531
UCREL1_237
Eutypa lata
UCREL1_237
N
0.530
TVAG_390840
Trichomonas vaginalis
TVAG_390840
N
0.523
PK00252.1
Cannabis sativa
PK00252.1
N
0.522
SMU15030186
Schmidtea mediterranea
SMU15030186
N
0.516
GLOINDRAFT_271935
Rhizophagus irregularis
GLOINDRAFT_271935
N
0.512
sox-2
Caenorhabditis elegans
WBGene00004949
I
0.511
Hba_21281
Heterorhabditis bacteriophora
Hba_21281
N
0.511
WUBG_12101
Wuchereria bancrofti
WUBG_12101
N
0.510
Cla016375
Citrullus lanatus
Cla016375
N
0.506
ACEP10857
Atta cephalotes
ACEP10857
N
0.505
K443DRAFT_58201
Laccaria amethystina
K443DRAFT_58201
N
0.503
LACBIDRAFT_169971
Laccaria bicolor
LACBIDRAFT_169971
N
0.503
Brh_R004116
Buceros rhinoceros
Brh_R004116
N
0.502
GPLIN_000970900
Globodera pallida
GPLIN_000970900
N
0.501
TVAG_114290
Trichomonas vaginalis
TVAG_114290
N
0.499
GLOTRDRAFT_8101
Gloeophyllum trabeum
GLOTRDRAFT_8101
N
0.496
SCLCIDRAFT_59496
Scleroderma citrinum
SCLCIDRAFT_59496
N
0.496
SOX18
Callithrix jacchus
ENSCJAG00000022379
N
0.494
ECPE_0001383301
Echinostoma caproni
ECPE_0001383301
N
0.494
TCNE_0000669501
Toxocara canis
TCNE_0000669501
N
0.493
PLEOSDRAFT_1017219
Pleurotus ostreatus
PLEOSDRAFT_1017219
N
0.487
EFA85451.1
Polysphondylium pallidum
EFA85451.1
N
0.485
VDBG_04936
Verticillium albo atrum
VDBG_04936
N
0.484
VDBG_04936
Verticillium alfalfae
VDBG_04936
N
0.484
BBX
Sorex araneus
ENSSARG00000008353
N
0.477
GLYMA20G01570
Glycine max
GLYMA20G01570
N
0.477
Hsal_05005--XP_001122373.1_APIME
Harpegnathos saltator
Hsal_05005--XP_001122373.1_APIME
N
0.475
PPA11045
Pristionchus pacificus
PPA11045
N
0.474
CBN19486
Caenorhabditis brenneri
CBN19486
N
0.472
fgenesh1_pg.C_scaffold_11000031
Sporobolomyces roseus
fgenesh1_pg.C_scaffold_11000031
N
0.472
ACHR008996
Anopheles christyi
ACHR008996
N
0.472
yakG000714
Bos grunniens
yakG000714
N
0.471
Sox6
Dipodomys ordii
ENSDORG00000013073
N
0.470
ENSVPAG00000008729
Vicugna pacos
ENSVPAG00000008729
N
0.470
D918_08317
Trichuris suis
D918_08317
N
0.467
ENSPANG00000005859
Papio anubis
ENSPANG00000005859
I
0.466
SINV24165
Solenopsis invicta
SINV24165
N
0.466
EDI_065970
Entamoeba dispar
EDI_065970
N
0.466
LDEC019307
Leptinotarsa decemlineata
LDEC019307
N
0.466
GLOINDRAFT_83691
Rhizophagus irregularis
GLOINDRAFT_83691
N
0.463
Sjc_0107520
Schistosoma japonicum
Sjc_0107520
N
0.463
PXEA_0002992801
Protopolystoma xenopodis
PXEA_0002992801
N
0.463
AARA000825
Anopheles arabiensis
AARA000825
N
0.462
ENSAPLG00000008530
Anas platyrhynchos
ENSAPLG00000008530
N
0.460
ENSGALG00000023601
Gallus gallus
ENSGALG00000023601
N
0.460
ENSMGAG00000006336
Meleagris gallopavo
ENSMGAG00000006336
N
0.460
SOX9
Ochotona princeps
ENSOPRG00000007860
N
0.460
Afo_R011382
Aptenodytes forsteri
Afo_R011382
N
0.460
Brh_R007868
Buceros rhinoceros
Brh_R007868
N
0.460
PPAI003639
Phlebotomus papatasi
PPAI003639
N
0.460
CBN25334
Caenorhabditis brenneri
CBN25334
N
0.454
SapurV1A.0237s0190
Salix purpurea
SapurV1A.0237s0190
N
0.454
SOX18
Echinops telfairi
ENSETEG00000001816
N
0.449
ENSPCAG00000014137
Procavia capensis
ENSPCAG00000014137
N
0.449
TCF7L2
Vicugna pacos
ENSVPAG00000008158
N
0.449
DILT_0001419401
Diphyllobothrium latum
DILT_0001419401
N
0.448
Hsal_04827--XP_001122993.1_APIME
Harpegnathos saltator
Hsal_04827--XP_001122993.1_APIME
N
0.447
SOX12
Dasypus novemcinctus
ENSDNOG00000044763
N
0.444
SPER_0001708101
Spirometra erinaceieuropaei
SPER_0001708101
N
0.441
SPER_0001952401
Spirometra erinaceieuropaei
SPER_0001952401
N
0.441
LEF1
Tursiops truncatus
ENSTTRG00000008109
N
0.439
Myotis_brandtii_SOX2_10019709
Myotis brandtii
Myotis_brandtii_SOX2_10019709
I
0.438
AMEC000538
Anopheles melas
AMEC000538
I
0.438
DAPPUDRAFT_259784
Daphnia pulex
DAPPUDRAFT_259784
N
0.437
ENSOARG00000000906
Ovis aries
ENSOARG00000000906
I
0.437
CNM02020
Cryptococcus neoformans
CNM02020
N
0.436
LbrM.21.1660
Leishmania braziliensis
LbrM.21.1660
N
0.435
UCREL1_749
Eutypa lata
UCREL1_749
N
0.434
Myotis_brandtii_TFAM_10031378
Myotis brandtii
Myotis_brandtii_TFAM_10031378
N
0.434
GLOINDRAFT_346686
Rhizophagus irregularis
GLOINDRAFT_346686
N
0.433
ENSSTOG00000011011
Ictidomys tridecemlineatus
ENSSTOG00000011011
I
0.432
POSPLDRAFT_103238
Postia placenta
POSPLDRAFT_103238
N
0.432
TRE_0000259001
Trichobilharzia regenti
TRE_0000259001
N
0.432
CMQ_5875
Grosmannia clavigera
CMQ_5875
N
0.430
GB40963
Apis mellifera
GB40963
N
0.430
PSEUBRA_SCAF2g02551
Pseudozyma brasiliensis
PSEUBRA_SCAF2g02551
N
0.429
GLOINDRAFT_25375
Rhizophagus irregularis
GLOINDRAFT_25375
N
0.428
68433
Aureococcus anophagefferens
68433
N
0.427
MELLADRAFT_86211
Melampsora laricipopulina
MELLADRAFT_86211
N
0.422
SOX8
Equus caballus
ENSECAG00000016320
I
0.421
M7I_1506
Glarea lozoyensis
M7I_1506
N
0.421