CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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YQE_03817
(
Dendroctonus ponderosae
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
YQE_03817
T333336_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENN79761
Sox
7
35
VLSENDKKPFIEEAERLREIHKREHPDYK
Links
Other
Sox
family TFs
Other
Dendroctonus ponderosae
TFs
194 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LDEC018263
Leptinotarsa decemlineata
LDEC018263
N
0.739
SOX8
Echinops telfairi
ENSETEG00000015470
N
0.703
SOX8
Microcebus murinus
ENSMICG00000011516
I
0.703
ENSTSYG00000006321
Tarsius syrichta
ENSTSYG00000006321
I
0.703
Afo_R012388
Aptenodytes forsteri
Afo_R012388
N
0.703
Cmyd_10006594
Chelonia mydas
Cmyd_10006594
N
0.703
Ogr00751
Ophisaurus gracilis
Ogr00751
I
0.703
HHAL000218-PA
Halyomorpha halys
HHAL000218-PA
N
0.702
ENSAPLG00000003216
Anas platyrhynchos
ENSAPLG00000003216
N
0.701
SOX8
Callithrix jacchus
ENSCJAG00000002684
I
0.701
SOX8
Felis catus
ENSFCAG00000004219
N
0.701
SMAR007058
Strigamia maritima
SMAR007058
N
0.699
SOX10
Echinops telfairi
ENSETEG00000012633
I
0.697
SOX9
Echinops telfairi
ENSETEG00000020237
I
0.697
ENSAPLG00000013168
Anas platyrhynchos
ENSAPLG00000013168
I
0.694
ENSFCAG00000015685
Felis catus
ENSFCAG00000015685
I
0.694
SOX9
Myotis lucifugus
ENSMLUG00000030312
I
0.694
ENSSHAG00000008406
Sarcophilus harrisii
ENSSHAG00000008406
I
0.694
SOX9
Tupaia belangeri
ENSTBEG00000000175
N
0.694
ENSP00000409273
Macaca fascicularis
ENSP00000409273
I
0.694
LotgiG143673
Lottia gigantea
LotgiG143673
N
0.693
ENSTSYG00000001164
Tarsius syrichta
ENSTSYG00000001164
I
0.692
L898_g4879
Steinernema monticolum
L898_g4879
N
0.692
DAPPUDRAFT_113704
Daphnia pulex
DAPPUDRAFT_113704
N
0.691
AMAM004028
Anopheles maculatus
AMAM004028
N
0.684
AMEC007393
Anopheles melas
AMEC007393
N
0.684
AMIN001220
Anopheles minimus
AMIN001220
N
0.684
PEQ_0000549401
Parascaris equorum
PEQ_0000549401
N
0.684
CpipJ_CPIJ014017
Culex pipiens
CpipJ_CPIJ014017
N
0.682
CPIJ014017
Culex quinquefasciatus
CPIJ014017
N
0.682
AFUN006689
Anopheles funestus
AFUN006689
N
0.682
SOX18
Procavia capensis
ENSPCAG00000015663
N
0.663
ISCW001638
Ixodes scapularis
ISCW001638
N
0.663
SOX18
Dasypus novemcinctus
ENSDNOG00000036237
N
0.656
SOX18
Pan troglodytes
ENSPTRG00000030459
I
0.656
ENSCSAG00000016751
Chlorocebus sabaeus
ENSCSAG00000016751
N
0.650
Ogr11176
Ophisaurus gracilis
Ogr11176
N
0.650
ENSAPLG00000010204
Anas platyrhynchos
ENSAPLG00000010204
N
0.648
ENSMGAG00000006624
Meleagris gallopavo
ENSMGAG00000006624
N
0.648
SOX17
Sorex araneus
ENSSARG00000009573
I
0.648
ENSBTAP00000027633-D1
Bos grunniens
ENSBTAP00000027633-D1
I
0.648
ENSOANG00000011188
Ornithorhynchus anatinus
ENSOANG00000011188
I
0.643
HMEL013676
Heliconius melpomene
HMEL013676
N
0.643
Sox17
Mus musculus
ENSMUSG00000025902
D
0.641
sox9a
Tetraodon nigroviridis
ENSTNIG00000001901
N
0.641
ENSAMXG00000017231
Astyanax mexicanus
ENSAMXG00000017231
I
0.638
ENSTTRG00000015548
Tursiops truncatus
ENSTTRG00000015548
I
0.638
CpipJ_CPIJ012041
Culex pipiens
CpipJ_CPIJ012041
N
0.637
BGIBMGA003081
Bombyx mori
BGIBMGA003081
N
0.637
CPIJ012041
Culex quinquefasciatus
CPIJ012041
N
0.637
L798_12046
Zootermopsis nevadensis
L798_12046
N
0.637
CLEC006960
Cimex lectularius
CLEC006960
N
0.637
LDEC017494
Leptinotarsa decemlineata
LDEC017494
N
0.637
AALB009867
Anopheles albimanus
AALB009867
N
0.637
ACOM022799
Anopheles coluzzii
ACOM022799
N
0.637
ACUA010594
Anopheles culicifacies
ACUA010594
N
0.637
AEPI003629
Anopheles epiroticus
AEPI003629
N
0.637
AFUN010198
Anopheles funestus
AFUN010198
N
0.637
AMIN009302
Anopheles minimus
AMIN009302
N
0.637
AQUA001261
Anopheles quadriannulatus
AQUA001261
N
0.637
ALUE_0000245701
Ascaris lumbricoides
ALUE_0000245701
N
0.637
AATE016483
Anopheles atroparvus
AATE016483
N
0.635
ACUA008827
Anopheles culicifacies
ACUA008827
N
0.635
AEPI007652
Anopheles epiroticus
AEPI007652
N
0.635
ALUE_0000639901
Ascaris lumbricoides
ALUE_0000639901
N
0.634
AAEL000771
Aedes aegypti
AAEL000771
N
0.633
AGAP028091
Anopheles gambiae
AGAP028091
N
0.633
PHUM433280
Pediculus humanus
PHUM433280
N
0.633
SINV16572
Solenopsis invicta
SINV16572
N
0.633
TC009856
Tribolium castaneum
TC009856
N
0.633
ACUA012732
Anopheles culicifacies
ACUA012732
N
0.633
AEPI007948
Anopheles epiroticus
AEPI007948
N
0.633
AFUN009317
Anopheles funestus
AFUN009317
N
0.633
AMAM023617
Anopheles maculatus
AMAM023617
N
0.633
AMEC011653
Anopheles melas
AMEC011653
N
0.633
AMEM002834
Anopheles merus
AMEM002834
N
0.633
ASTEI06131
Anopheles stephensi
ASTEI06131
N
0.633
MPER_06248
Moniliophthora perniciosa
MPER_06248
N
0.593
PredSwiss_ASS2010_3779.1
Pneumocystis carinii
PredSwiss_ASS2010_3779.1
N
0.586
PredSwiss_CON1835.1
Pneumocystis carinii
PredSwiss_CON1835.1
N
0.586
L798_00185
Zootermopsis nevadensis
L798_00185
N
0.579
PK00252.1
Cannabis sativa
PK00252.1
N
0.576
WUBG_12101
Wuchereria bancrofti
WUBG_12101
N
0.572
SOX2
Felis catus
ENSFCAG00000029205
I
0.568
SOX2
Procavia capensis
ENSPCAG00000003690
I
0.568
BGLB010902
Biomphalaria glabrata
BGLB010902
N
0.566
ADIR005631
Anopheles dirus
ADIR005631
N
0.561
ASTEI06408
Anopheles stephensi
ASTEI06408
N
0.561
67303
Aureococcus anophagefferens
67303
N
0.559
ACEP25851
Atta cephalotes
ACEP25851
N
0.557
AALB009772
Anopheles albimanus
AALB009772
N
0.557
AATE015714
Anopheles atroparvus
AATE015714
N
0.557
ACOM026653
Anopheles coluzzii
ACOM026653
N
0.557
ADIR009661
Anopheles dirus
ADIR009661
N
0.557
AQUA005880
Anopheles quadriannulatus
AQUA005880
N
0.557
OESDEN_19415
Oesophagostomum dentatum
OESDEN_19415
N
0.557
ANCDUO_13942
Ancylostoma duodenale
ANCDUO_13942
N
0.556
SINV19749
Solenopsis invicta
SINV19749
N
0.548
GPUH_0000499601
Gongylonema pulchrum
GPUH_0000499601
N
0.546
Afo_R012670
Aptenodytes forsteri
Afo_R012670
N
0.544
AMEM007694
Anopheles merus
AMEM007694
N
0.542
CpipJ_CPIJ012498
Culex pipiens
CpipJ_CPIJ012498
N
0.539
CPIJ012498
Culex quinquefasciatus
CPIJ012498
N
0.539
YQE_08562
Dendroctonus ponderosae
YQE_08562
N
0.539
YQE_13041
Dendroctonus ponderosae
YQE_13041
N
0.539
ASIS001889
Anopheles sinensis
ASIS001889
N
0.539
PPAI005428
Phlebotomus papatasi
PPAI005428
N
0.535
HmN_000301900
Hymenolepis microstoma
HmN_000301900
N
0.534
ENSOANG00000002448
Ornithorhynchus anatinus
ENSOANG00000002448
I
0.533
HHAL001293-PA
Halyomorpha halys
HHAL001293-PA
N
0.530
Hmg20b
Mus musculus
ENSMUSG00000020232
D
0.529
Myotis_brandtii_Hmgb2_10029741
Myotis brandtii
Myotis_brandtii_Hmgb2_10029741
N
0.527
MESCA006364
Megaselia scalaris
MESCA006364
N
0.525
Minc18937
Meloidogyne incognita
Minc18937
N
0.525
Cla016375
Citrullus lanatus
Cla016375
N
0.521
Myotis_brandtii_TIMM8A_10019481
Myotis brandtii
Myotis_brandtii_TIMM8A_10019481
N
0.520
Ogr13852
Ophisaurus gracilis
Ogr13852
N
0.517
DDB_G0287073
Dictyostelium discoideum
DDB_G0287073
N
0.514
GLOINDRAFT_335861
Rhizophagus irregularis
GLOINDRAFT_335861
N
0.514
ENSPMAG00000004519
Petromyzon marinus
ENSPMAG00000004519
N
0.511
SMAR010125
Strigamia maritima
SMAR010125
N
0.511
HelroG68905
Helobdella robusta
HelroG68905
N
0.510
SINV24165
Solenopsis invicta
SINV24165
N
0.508
estExt_fgeneshDP_kg.C_1020010
Dictyostelium purpureum
estExt_fgeneshDP_kg.C_1020010
N
0.508
SOX9
Ochotona princeps
ENSOPRG00000007860
N
0.507
HHAL001583-PA
Halyomorpha halys
HHAL001583-PA
N
0.507
L798_05432
Zootermopsis nevadensis
L798_05432
N
0.497
RPRC001038
Rhodnius prolixus
RPRC001038
N
0.497
ENSFALG00000011068
Ficedula albicollis
ENSFALG00000011068
N
0.496
Aan_R006397
Calypte anna
Aan_R006397
N
0.496
Gfo_R008143
Geospiza fortis
Gfo_R008143
N
0.496
ENSNLEG00000002693
Nomascus leucogenys
ENSNLEG00000002693
N
0.492
JL09_g5343
Pichia kudriavzevii
JL09_g5343
N
0.490
TcIL3000.10.440
Trypanosoma congolense
TcIL3000.10.440
N
0.490
Gorai.005G106800
Gossypium raimondii
Gorai.005G106800
N
0.490
ENSPSIG00000016857
Pelodiscus sinensis
ENSPSIG00000016857
N
0.489
Hsal_04827--XP_001122993.1_APIME
Harpegnathos saltator
Hsal_04827--XP_001122993.1_APIME
N
0.489
MESCA012239
Megaselia scalaris
MESCA012239
I
0.488
fgenesh_scip_prom.28083.3150
Phytophthora lateralis
fgenesh_scip_prom.28083.3150
N
0.487
Phyra76615
Phytophthora ramorum
Phyra76615
N
0.487
Physo127875
Phytophthora sojae
Physo127875
N
0.487
fgenesh1_pm.C_scaffold_23000166
Phytophthora capsici
fgenesh1_pm.C_scaffold_23000166
N
0.487
UCREL1_237
Eutypa lata
UCREL1_237
N
0.484
Sox6
Dipodomys ordii
ENSDORG00000013073
N
0.483
ENSVPAG00000008729
Vicugna pacos
ENSVPAG00000008729
N
0.483
M422DRAFT_54734
Sphaerobolus stellatus
M422DRAFT_54734
N
0.483
sox-2
Caenorhabditis elegans
WBGene00004949
I
0.481
F443_09320
Phytophthora parasitica
F443_09320
N
0.479
BBX
Sorex araneus
ENSSARG00000008353
N
0.477
M404DRAFT_787968
Pisolithus tinctorius
M404DRAFT_787968
N
0.477
TVAG_390840
Trichomonas vaginalis
TVAG_390840
N
0.472
SMU15030186
Schmidtea mediterranea
SMU15030186
N
0.472
GLOINDRAFT_271935
Rhizophagus irregularis
GLOINDRAFT_271935
N
0.465
SOX18
Callithrix jacchus
ENSCJAG00000022379
N
0.460
WALSEDRAFT_59420
Wallemia sebi
WALSEDRAFT_59420
N
0.458
SOX18
Echinops telfairi
ENSETEG00000001816
N
0.455
ENSPCAG00000014137
Procavia capensis
ENSPCAG00000014137
N
0.455
TCF7L2
Vicugna pacos
ENSVPAG00000008158
N
0.455
LEF1
Tursiops truncatus
ENSTTRG00000008109
N
0.454
Ogr08337
Ophisaurus gracilis
Ogr08337
N
0.454
Hba_21281
Heterorhabditis bacteriophora
Hba_21281
N
0.454
TCNE_0000669501
Toxocara canis
TCNE_0000669501
N
0.452
GPLIN_000970900
Globodera pallida
GPLIN_000970900
N
0.451
PLEOSDRAFT_1017219
Pleurotus ostreatus
PLEOSDRAFT_1017219
N
0.449
GLOTRDRAFT_8101
Gloeophyllum trabeum
GLOTRDRAFT_8101
N
0.447
SCLCIDRAFT_59496
Scleroderma citrinum
SCLCIDRAFT_59496
N
0.447
LCUP001586
Lucilia cuprina
LCUP001586
N
0.447
ECPE_0001383301
Echinostoma caproni
ECPE_0001383301
N
0.446
VDBG_04936
Verticillium albo atrum
VDBG_04936
N
0.445
VDBG_04936
Verticillium alfalfae
VDBG_04936
N
0.445
Brh_R004116
Buceros rhinoceros
Brh_R004116
N
0.444
AARA000825
Anopheles arabiensis
AARA000825
N
0.443
K443DRAFT_58201
Laccaria amethystina
K443DRAFT_58201
N
0.441
LACBIDRAFT_169971
Laccaria bicolor
LACBIDRAFT_169971
N
0.441
TVAG_114290
Trichomonas vaginalis
TVAG_114290
N
0.439
GLOINDRAFT_83691
Rhizophagus irregularis
GLOINDRAFT_83691
N
0.438
EFA85451.1
Polysphondylium pallidum
EFA85451.1
N
0.438
ACEP10857
Atta cephalotes
ACEP10857
N
0.434
GLYMA20G01570
Glycine max
GLYMA20G01570
N
0.433
Hsal_05005--XP_001122373.1_APIME
Harpegnathos saltator
Hsal_05005--XP_001122373.1_APIME
N
0.428
fgenesh1_pg.C_scaffold_11000031
Sporobolomyces roseus
fgenesh1_pg.C_scaffold_11000031
N
0.423
SPER_0001708101
Spirometra erinaceieuropaei
SPER_0001708101
N
0.422
SPER_0001952401
Spirometra erinaceieuropaei
SPER_0001952401
N
0.422
ENSAPLG00000008530
Anas platyrhynchos
ENSAPLG00000008530
N
0.420
ENSGALG00000023601
Gallus gallus
ENSGALG00000023601
N
0.420
ENSMGAG00000006336
Meleagris gallopavo
ENSMGAG00000006336
N
0.420
Afo_R011382
Aptenodytes forsteri
Afo_R011382
N
0.420
Brh_R007868
Buceros rhinoceros
Brh_R007868
N
0.420
yakG000714
Bos grunniens
yakG000714
N
0.420
Sjc_0107520
Schistosoma japonicum
Sjc_0107520
N
0.420
PXEA_0002992801
Protopolystoma xenopodis
PXEA_0002992801
N
0.420
PPAI003639
Phlebotomus papatasi
PPAI003639
N
0.418
LDEC019307
Leptinotarsa decemlineata
LDEC019307
N
0.417
DILT_0001419401
Diphyllobothrium latum
DILT_0001419401
N
0.416