CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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F443_09320
(
Phytophthora parasitica
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
F443_09320
T329471_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ETI46280
Sox
286
320
TKMTWHDLTKEEKDAYTEKAKADKQRFLKELSEFL
ETI46281
Sox
286
320
TKMTWHDLTKEEKDAYTEKAKADKQRFLKELSEFL
ETI46282
Sox
153
187
TKMTWHDLTKEEKDAYTEKAKADKQRFLKELSEFL
ETI46283
Sox
153
187
TKMTWHDLTKEEKDAYTEKAKADKQRFLKELSEFL
Links
Other
Sox
family TFs
Other
Phytophthora parasitica
TFs
172 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Physo127875
Phytophthora sojae
Physo127875
N
0.690
fgenesh1_pm.C_scaffold_23000166
Phytophthora capsici
fgenesh1_pm.C_scaffold_23000166
N
0.690
Phyra76615
Phytophthora ramorum
Phyra76615
N
0.689
fgenesh_scip_prom.28083.3150
Phytophthora lateralis
fgenesh_scip_prom.28083.3150
N
0.663
JL09_g5343
Pichia kudriavzevii
JL09_g5343
N
0.596
Minc18937
Meloidogyne incognita
Minc18937
N
0.565
ANCDUO_13942
Ancylostoma duodenale
ANCDUO_13942
N
0.565
OESDEN_19415
Oesophagostomum dentatum
OESDEN_19415
N
0.565
67303
Aureococcus anophagefferens
67303
N
0.562
ENSFALG00000011068
Ficedula albicollis
ENSFALG00000011068
N
0.561
ENSPSIG00000016857
Pelodiscus sinensis
ENSPSIG00000016857
N
0.561
Aan_R006397
Calypte anna
Aan_R006397
N
0.561
Gfo_R008143
Geospiza fortis
Gfo_R008143
N
0.561
HmN_000301900
Hymenolepis microstoma
HmN_000301900
N
0.560
DDB_G0287073
Dictyostelium discoideum
DDB_G0287073
N
0.550
estExt_fgeneshDP_kg.C_1020010
Dictyostelium purpureum
estExt_fgeneshDP_kg.C_1020010
N
0.550
CpipJ_CPIJ012041
Culex pipiens
CpipJ_CPIJ012041
N
0.547
BGIBMGA003081
Bombyx mori
BGIBMGA003081
N
0.547
CPIJ012041
Culex quinquefasciatus
CPIJ012041
N
0.547
L798_12046
Zootermopsis nevadensis
L798_12046
N
0.547
CLEC006960
Cimex lectularius
CLEC006960
N
0.547
LDEC017494
Leptinotarsa decemlineata
LDEC017494
N
0.547
AALB009867
Anopheles albimanus
AALB009867
N
0.547
ACOM022799
Anopheles coluzzii
ACOM022799
N
0.547
ACUA010594
Anopheles culicifacies
ACUA010594
N
0.547
AEPI003629
Anopheles epiroticus
AEPI003629
N
0.547
AFUN010198
Anopheles funestus
AFUN010198
N
0.547
AMIN009302
Anopheles minimus
AMIN009302
N
0.547
AQUA001261
Anopheles quadriannulatus
AQUA001261
N
0.547
Myotis_brandtii_Hmgb2_10029741
Myotis brandtii
Myotis_brandtii_Hmgb2_10029741
N
0.544
Myotis_brandtii_TIMM8A_10019481
Myotis brandtii
Myotis_brandtii_TIMM8A_10019481
N
0.544
Gorai.005G106800
Gossypium raimondii
Gorai.005G106800
N
0.544
Hmg20b
Mus musculus
ENSMUSG00000020232
D
0.543
PITG_13146
Phytophthora infestans
PITG_13146
N
0.542
ENSOANG00000011188
Ornithorhynchus anatinus
ENSOANG00000011188
I
0.541
ALUE_0000245701
Ascaris lumbricoides
ALUE_0000245701
N
0.541
PITG_13138
Phytophthora infestans
PITG_13138
N
0.540
MPER_06248
Moniliophthora perniciosa
MPER_06248
N
0.536
TcIL3000.10.440
Trypanosoma congolense
TcIL3000.10.440
N
0.532
ENSBTAP00000027633-D1
Bos grunniens
ENSBTAP00000027633-D1
I
0.532
ALUE_0000639901
Ascaris lumbricoides
ALUE_0000639901
N
0.532
Sox17
Mus musculus
ENSMUSG00000025902
D
0.530
SOX17
Sorex araneus
ENSSARG00000009573
I
0.530
ENSTTRG00000015548
Tursiops truncatus
ENSTTRG00000015548
I
0.530
Ogr11176
Ophisaurus gracilis
Ogr11176
N
0.530
ENSAMXG00000017231
Astyanax mexicanus
ENSAMXG00000017231
I
0.523
ENSAPLG00000010204
Anas platyrhynchos
ENSAPLG00000010204
N
0.523
ENSCSAG00000016751
Chlorocebus sabaeus
ENSCSAG00000016751
N
0.523
SOX18
Dasypus novemcinctus
ENSDNOG00000036237
N
0.523
ENSMGAG00000006624
Meleagris gallopavo
ENSMGAG00000006624
N
0.523
SOX18
Procavia capensis
ENSPCAG00000015663
N
0.523
SOX18
Pan troglodytes
ENSPTRG00000030459
I
0.523
GLOINDRAFT_335861
Rhizophagus irregularis
GLOINDRAFT_335861
N
0.523
L798_00185
Zootermopsis nevadensis
L798_00185
N
0.523
PredSwiss_ASS2010_3779.1
Pneumocystis carinii
PredSwiss_ASS2010_3779.1
N
0.523
PredSwiss_CON1835.1
Pneumocystis carinii
PredSwiss_CON1835.1
N
0.523
ECPE_0001383301
Echinostoma caproni
ECPE_0001383301
N
0.516
TVAG_114290
Trichomonas vaginalis
TVAG_114290
N
0.512
LEF1
Tursiops truncatus
ENSTTRG00000008109
N
0.509
M422DRAFT_54734
Sphaerobolus stellatus
M422DRAFT_54734
N
0.507
WUBG_12101
Wuchereria bancrofti
WUBG_12101
N
0.506
ENSNLEG00000002693
Nomascus leucogenys
ENSNLEG00000002693
N
0.506
HelroG68905
Helobdella robusta
HelroG68905
N
0.495
AAEL000771
Aedes aegypti
AAEL000771
N
0.494
AGAP028091
Anopheles gambiae
AGAP028091
N
0.494
ENSTSYG00000001164
Tarsius syrichta
ENSTSYG00000001164
I
0.494
PHUM433280
Pediculus humanus
PHUM433280
N
0.494
SINV16572
Solenopsis invicta
SINV16572
N
0.494
TC009856
Tribolium castaneum
TC009856
N
0.494
ACUA012732
Anopheles culicifacies
ACUA012732
N
0.494
AEPI007948
Anopheles epiroticus
AEPI007948
N
0.494
AFUN009317
Anopheles funestus
AFUN009317
N
0.494
AMAM023617
Anopheles maculatus
AMAM023617
N
0.494
AMEC011653
Anopheles melas
AMEC011653
N
0.494
AMEM002834
Anopheles merus
AMEM002834
N
0.494
ASTEI06131
Anopheles stephensi
ASTEI06131
N
0.494
L898_g4879
Steinernema monticolum
L898_g4879
N
0.494
TVAG_390840
Trichomonas vaginalis
TVAG_390840
N
0.493
ENSPMAG00000004519
Petromyzon marinus
ENSPMAG00000004519
N
0.488
Ogr13852
Ophisaurus gracilis
Ogr13852
N
0.488
SMAR007058
Strigamia maritima
SMAR007058
N
0.487
EFA85451.1
Polysphondylium pallidum
EFA85451.1
N
0.487
PEQ_0000549401
Parascaris equorum
PEQ_0000549401
N
0.487
ENSAPLG00000003216
Anas platyrhynchos
ENSAPLG00000003216
N
0.485
ENSAPLG00000008530
Anas platyrhynchos
ENSAPLG00000008530
N
0.485
ENSAPLG00000013168
Anas platyrhynchos
ENSAPLG00000013168
I
0.485
SOX8
Callithrix jacchus
ENSCJAG00000002684
I
0.485
SOX10
Echinops telfairi
ENSETEG00000012633
I
0.485
SOX8
Echinops telfairi
ENSETEG00000015470
N
0.485
SOX9
Echinops telfairi
ENSETEG00000020237
I
0.485
SOX8
Felis catus
ENSFCAG00000004219
N
0.485
ENSFCAG00000015685
Felis catus
ENSFCAG00000015685
I
0.485
ENSGALG00000023601
Gallus gallus
ENSGALG00000023601
N
0.485
ENSMGAG00000006336
Meleagris gallopavo
ENSMGAG00000006336
N
0.485
SOX8
Microcebus murinus
ENSMICG00000011516
I
0.485
SOX9
Myotis lucifugus
ENSMLUG00000030312
I
0.485
ENSSHAG00000008406
Sarcophilus harrisii
ENSSHAG00000008406
I
0.485
SOX9
Tupaia belangeri
ENSTBEG00000000175
N
0.485
sox9a
Tetraodon nigroviridis
ENSTNIG00000001901
N
0.485
ENSTSYG00000006321
Tarsius syrichta
ENSTSYG00000006321
I
0.485
Afo_R011382
Aptenodytes forsteri
Afo_R011382
N
0.485
Afo_R012388
Aptenodytes forsteri
Afo_R012388
N
0.485
Brh_R007868
Buceros rhinoceros
Brh_R007868
N
0.485
Cmyd_10006594
Chelonia mydas
Cmyd_10006594
N
0.485
ENSP00000409273
Macaca fascicularis
ENSP00000409273
I
0.485
Ogr00751
Ophisaurus gracilis
Ogr00751
I
0.485
PK00252.1
Cannabis sativa
PK00252.1
N
0.485
ACUA008827
Anopheles culicifacies
ACUA008827
N
0.484
AEPI007652
Anopheles epiroticus
AEPI007652
N
0.484
AFUN006689
Anopheles funestus
AFUN006689
N
0.484
AMAM004028
Anopheles maculatus
AMAM004028
N
0.484
AMIN001220
Anopheles minimus
AMIN001220
N
0.484
DAPPUDRAFT_113704
Daphnia pulex
DAPPUDRAFT_113704
N
0.479
HMEL013676
Heliconius melpomene
HMEL013676
N
0.479
YQE_03817
Dendroctonus ponderosae
YQE_03817
N
0.479
LDEC018263
Leptinotarsa decemlineata
LDEC018263
N
0.479
Cla016375
Citrullus lanatus
Cla016375
N
0.478
CpipJ_CPIJ014017
Culex pipiens
CpipJ_CPIJ014017
N
0.477
CPIJ014017
Culex quinquefasciatus
CPIJ014017
N
0.477
BBX
Sorex araneus
ENSSARG00000008353
N
0.477
ISCW001638
Ixodes scapularis
ISCW001638
N
0.477
LotgiG143673
Lottia gigantea
LotgiG143673
N
0.477
HHAL000218-PA
Halyomorpha halys
HHAL000218-PA
N
0.477
AATE016483
Anopheles atroparvus
AATE016483
N
0.477
AMEC007393
Anopheles melas
AMEC007393
N
0.477
SOX18
Echinops telfairi
ENSETEG00000001816
N
0.472
SINV19749
Solenopsis invicta
SINV19749
N
0.472
ADIR005631
Anopheles dirus
ADIR005631
N
0.472
ASTEI06408
Anopheles stephensi
ASTEI06408
N
0.472
TCNE_0000669501
Toxocara canis
TCNE_0000669501
N
0.468
ENSPCAG00000014137
Procavia capensis
ENSPCAG00000014137
N
0.466
SOX2
Felis catus
ENSFCAG00000029205
I
0.465
SOX2
Procavia capensis
ENSPCAG00000003690
I
0.465
GLOINDRAFT_271935
Rhizophagus irregularis
GLOINDRAFT_271935
N
0.464
EDI_065970
Entamoeba dispar
EDI_065970
N
0.463
Myotis_brandtii_TFAM_10031378
Myotis brandtii
Myotis_brandtii_TFAM_10031378
N
0.458
DILT_0001419401
Diphyllobothrium latum
DILT_0001419401
N
0.457
L798_05432
Zootermopsis nevadensis
L798_05432
N
0.456
CBN25334
Caenorhabditis brenneri
CBN25334
N
0.454
MESCA006364
Megaselia scalaris
MESCA006364
N
0.454
68433
Aureococcus anophagefferens
68433
N
0.454
ENSOANG00000002448
Ornithorhynchus anatinus
ENSOANG00000002448
I
0.453
AMEM007694
Anopheles merus
AMEM007694
N
0.453
TCF7L2
Vicugna pacos
ENSVPAG00000008158
N
0.451
yakG000714
Bos grunniens
yakG000714
N
0.450
Sox6
Dipodomys ordii
ENSDORG00000013073
N
0.449
ENSVPAG00000008729
Vicugna pacos
ENSVPAG00000008729
N
0.449
M7I_1506
Glarea lozoyensis
M7I_1506
N
0.448
SOX9
Ochotona princeps
ENSOPRG00000007860
N
0.447
M404DRAFT_787968
Pisolithus tinctorius
M404DRAFT_787968
N
0.444
GPUH_0000499601
Gongylonema pulchrum
GPUH_0000499601
N
0.440
GLYMA20G01570
Glycine max
GLYMA20G01570
N
0.437
YQE_08562
Dendroctonus ponderosae
YQE_08562
N
0.437
CBN19486
Caenorhabditis brenneri
CBN19486
N
0.436
CMQ_5875
Grosmannia clavigera
CMQ_5875
N
0.436
HHAL001583-PA
Halyomorpha halys
HHAL001583-PA
N
0.436
PPA11045
Pristionchus pacificus
PPA11045
N
0.435
DAPPUDRAFT_259784
Daphnia pulex
DAPPUDRAFT_259784
N
0.431
SapurV1A.0237s0190
Salix purpurea
SapurV1A.0237s0190
N
0.430
UCREL1_237
Eutypa lata
UCREL1_237
N
0.429
LbrM.21.1660
Leishmania braziliensis
LbrM.21.1660
N
0.429
Afo_R012670
Aptenodytes forsteri
Afo_R012670
N
0.429
RPRC001038
Rhodnius prolixus
RPRC001038
N
0.426
ACEP25851
Atta cephalotes
ACEP25851
N
0.419
MELLADRAFT_86211
Melampsora laricipopulina
MELLADRAFT_86211
N
0.419
HHAL001293-PA
Halyomorpha halys
HHAL001293-PA
N
0.419
AALB009772
Anopheles albimanus
AALB009772
N
0.419
AATE015714
Anopheles atroparvus
AATE015714
N
0.419
ACOM026653
Anopheles coluzzii
ACOM026653
N
0.419
ADIR009661
Anopheles dirus
ADIR009661
N
0.419
AQUA005880
Anopheles quadriannulatus
AQUA005880
N
0.419