CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
68433
(
Aureococcus anophagefferens
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
68433
T333907_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
68433
Sox
275
312
AQECAKLWDKLTPEAERKYQALADEDKVRYEKEMDLWR
Links
Other
Sox
family TFs
Other
Aureococcus anophagefferens
TFs
109 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CMQ_5875
Grosmannia clavigera
CMQ_5875
N
0.549
Myotis_brandtii_TFAM_10031378
Myotis brandtii
Myotis_brandtii_TFAM_10031378
N
0.502
TCNE_0000669501
Toxocara canis
TCNE_0000669501
N
0.499
DDB_G0287073
Dictyostelium discoideum
DDB_G0287073
N
0.497
67303
Aureococcus anophagefferens
67303
N
0.496
PPA11045
Pristionchus pacificus
PPA11045
N
0.494
NechaG59892
Fusarium solani
NechaG59892
N
0.491
estExt_Genewise1.C_sca_3_chr4_2_00418
Nectria haematococca
estExt_Genewise1.C_sca_3_chr4_2_00418
N
0.491
EFA85451.1
Polysphondylium pallidum
EFA85451.1
N
0.491
JL09_g5343
Pichia kudriavzevii
JL09_g5343
N
0.490
Myotis_brandtii_Hmgb2_10029741
Myotis brandtii
Myotis_brandtii_Hmgb2_10029741
N
0.489
ECPE_0001383301
Echinostoma caproni
ECPE_0001383301
N
0.487
ANCDUO_13942
Ancylostoma duodenale
ANCDUO_13942
N
0.486
OESDEN_19415
Oesophagostomum dentatum
OESDEN_19415
N
0.486
estExt_fgeneshDP_kg.C_1020010
Dictyostelium purpureum
estExt_fgeneshDP_kg.C_1020010
N
0.484
DILT_0001419401
Diphyllobothrium latum
DILT_0001419401
N
0.484
DAPPUDRAFT_259784
Daphnia pulex
DAPPUDRAFT_259784
N
0.482
OESDEN_13669
Oesophagostomum dentatum
OESDEN_13669
N
0.481
Minc18937
Meloidogyne incognita
Minc18937
N
0.477
HmN_000301900
Hymenolepis microstoma
HmN_000301900
N
0.475
PV06_10806
Exophiala oligosperma
PV06_10806
N
0.469
ANCCEY_05358
Ancylostoma ceylanicum
ANCCEY_05358
N
0.466
SapurV1A.0237s0190
Salix purpurea
SapurV1A.0237s0190
N
0.465
ENSPMAG00000004519
Petromyzon marinus
ENSPMAG00000004519
N
0.459
Hsal_05005--XP_001122373.1_APIME
Harpegnathos saltator
Hsal_05005--XP_001122373.1_APIME
N
0.459
Ogr13852
Ophisaurus gracilis
Ogr13852
N
0.459
Hmg20b
Mus musculus
ENSMUSG00000020232
D
0.458
ENSNLEG00000002693
Nomascus leucogenys
ENSNLEG00000002693
N
0.458
Myotis_brandtii_TIMM8A_10019481
Myotis brandtii
Myotis_brandtii_TIMM8A_10019481
N
0.456
Gorai.005G106800
Gossypium raimondii
Gorai.005G106800
N
0.456
PredSwiss_ASS2010_3779.1
Pneumocystis carinii
PredSwiss_ASS2010_3779.1
N
0.456
PredSwiss_CON1835.1
Pneumocystis carinii
PredSwiss_CON1835.1
N
0.456
F443_09320
Phytophthora parasitica
F443_09320
N
0.454
ASIM_0000075001
Anisakis simplex
ASIM_0000075001
N
0.454
MESCA006364
Megaselia scalaris
MESCA006364
N
0.450
M7I_1506
Glarea lozoyensis
M7I_1506
N
0.448
DICVIV_04576
Dictyocaulus viviparus
DICVIV_04576
N
0.448
HelroG68905
Helobdella robusta
HelroG68905
N
0.447
fgenesh_scip_prom.28083.3150
Phytophthora lateralis
fgenesh_scip_prom.28083.3150
N
0.446
Physo127875
Phytophthora sojae
Physo127875
N
0.446
fgenesh1_pm.C_scaffold_23000166
Phytophthora capsici
fgenesh1_pm.C_scaffold_23000166
N
0.446
GLOINDRAFT_271935
Rhizophagus irregularis
GLOINDRAFT_271935
N
0.444
WUBG_12101
Wuchereria bancrofti
WUBG_12101
N
0.443
Phyra76615
Phytophthora ramorum
Phyra76615
N
0.439
EMIHUDRAFT_108701
Emiliania huxleyi
EMIHUDRAFT_108701
N
0.438
GLYMA20G01570
Glycine max
GLYMA20G01570
N
0.437
yakG000714
Bos grunniens
yakG000714
N
0.437
EMIHUDRAFT_107556
Emiliania huxleyi
EMIHUDRAFT_107556
N
0.436
GLOINDRAFT_335861
Rhizophagus irregularis
GLOINDRAFT_335861
N
0.432
HHAL001583-PA
Halyomorpha halys
HHAL001583-PA
N
0.431
Cla016375
Citrullus lanatus
Cla016375
N
0.430
CBN25334
Caenorhabditis brenneri
CBN25334
N
0.429
CpipJ_CPIJ012041
Culex pipiens
CpipJ_CPIJ012041
N
0.427
BGIBMGA003081
Bombyx mori
BGIBMGA003081
N
0.427
CPIJ012041
Culex quinquefasciatus
CPIJ012041
N
0.427
L798_12046
Zootermopsis nevadensis
L798_12046
N
0.427
SINV19749
Solenopsis invicta
SINV19749
N
0.427
CLEC006960
Cimex lectularius
CLEC006960
N
0.427
LDEC017494
Leptinotarsa decemlineata
LDEC017494
N
0.427
AALB009867
Anopheles albimanus
AALB009867
N
0.427
ACOM022799
Anopheles coluzzii
ACOM022799
N
0.427
ACUA010594
Anopheles culicifacies
ACUA010594
N
0.427
ADIR005631
Anopheles dirus
ADIR005631
N
0.427
AEPI003629
Anopheles epiroticus
AEPI003629
N
0.427
AFUN010198
Anopheles funestus
AFUN010198
N
0.427
AMIN009302
Anopheles minimus
AMIN009302
N
0.427
AQUA001261
Anopheles quadriannulatus
AQUA001261
N
0.427
ASTEI06408
Anopheles stephensi
ASTEI06408
N
0.427
M422DRAFT_54734
Sphaerobolus stellatus
M422DRAFT_54734
N
0.425
TcIL3000.10.440
Trypanosoma congolense
TcIL3000.10.440
N
0.425
EDI_065970
Entamoeba dispar
EDI_065970
N
0.424
L798_00185
Zootermopsis nevadensis
L798_00185
N
0.422
RPRC001038
Rhodnius prolixus
RPRC001038
N
0.421
SOX2
Felis catus
ENSFCAG00000029205
I
0.420
ENSOANG00000011188
Ornithorhynchus anatinus
ENSOANG00000011188
I
0.420
SOX2
Procavia capensis
ENSPCAG00000003690
I
0.420
ALUE_0000245701
Ascaris lumbricoides
ALUE_0000245701
N
0.420
AAEL000771
Aedes aegypti
AAEL000771
N
0.419
ACEP25851
Atta cephalotes
ACEP25851
N
0.419
AGAP028091
Anopheles gambiae
AGAP028091
N
0.419
PHUM433280
Pediculus humanus
PHUM433280
N
0.419
SINV16572
Solenopsis invicta
SINV16572
N
0.419
TC009856
Tribolium castaneum
TC009856
N
0.419
HHAL001293-PA
Halyomorpha halys
HHAL001293-PA
N
0.419
PK00252.1
Cannabis sativa
PK00252.1
N
0.419
AALB009772
Anopheles albimanus
AALB009772
N
0.419
AATE015714
Anopheles atroparvus
AATE015714
N
0.419
ACOM026653
Anopheles coluzzii
ACOM026653
N
0.419
ACUA012732
Anopheles culicifacies
ACUA012732
N
0.419
ADIR009661
Anopheles dirus
ADIR009661
N
0.419
AEPI007948
Anopheles epiroticus
AEPI007948
N
0.419
AFUN009317
Anopheles funestus
AFUN009317
N
0.419
AMAM023617
Anopheles maculatus
AMAM023617
N
0.419
AMEC011653
Anopheles melas
AMEC011653
N
0.419
AMEM002834
Anopheles merus
AMEM002834
N
0.419
AQUA005880
Anopheles quadriannulatus
AQUA005880
N
0.419
ASTEI06131
Anopheles stephensi
ASTEI06131
N
0.419
ALUE_0000639901
Ascaris lumbricoides
ALUE_0000639901
N
0.419
L798_05432
Zootermopsis nevadensis
L798_05432
N
0.418
TVAG_390840
Trichomonas vaginalis
TVAG_390840
N
0.418
ENSBTAP00000027633-D1
Bos grunniens
ENSBTAP00000027633-D1
I
0.418
Thhalv10015680m.g
Eutrema salsugineum
Thhalv10015680m.g
N
0.418
Sox17
Mus musculus
ENSMUSG00000025902
D
0.417
SOX17
Sorex araneus
ENSSARG00000009573
I
0.417
ENSTTRG00000015548
Tursiops truncatus
ENSTTRG00000015548
I
0.417
TVAG_114290
Trichomonas vaginalis
TVAG_114290
N
0.417
Ogr11176
Ophisaurus gracilis
Ogr11176
N
0.417
PITG_13138
Phytophthora infestans
PITG_13138
N
0.416
PITG_13146
Phytophthora infestans
PITG_13146
N
0.416