CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DICVIV_04576
(
Dictyocaulus viviparus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
DICVIV_04576
T336207_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
DICVIV_04576
Sox
29
74
PEDFLIQVAQELGRMWKNVSVDERDMYERKALADKERYAEEMRDYK
Links
Other
Sox
family TFs
Other
Dictyocaulus viviparus
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OESDEN_13669
Oesophagostomum dentatum
OESDEN_13669
N
0.519
OESDEN_19415
Oesophagostomum dentatum
OESDEN_19415
N
0.507
ASIM_0000075001
Anisakis simplex
ASIM_0000075001
N
0.500
ANCCAN_05715
Ancylostoma caninum
ANCCAN_05715
N
0.490
NechaG79025
Fusarium solani
NechaG79025
N
0.480
fgenesh1_pg.sca_3_chr4_2_0000426
Nectria haematococca
fgenesh1_pg.sca_3_chr4_2_0000426
N
0.480
CMQ_5875
Grosmannia clavigera
CMQ_5875
N
0.479
PV06_10806
Exophiala oligosperma
PV06_10806
N
0.473
EMIHUDRAFT_108701
Emiliania huxleyi
EMIHUDRAFT_108701
N
0.460
ANCDUO_13942
Ancylostoma duodenale
ANCDUO_13942
N
0.452
CaO19.1731
Candida albicans
CaO19.1731
N
0.450
CaO19.9299
Candida albicans
CaO19.9299
N
0.450
EMIHUDRAFT_107556
Emiliania huxleyi
EMIHUDRAFT_107556
N
0.449
68433
Aureococcus anophagefferens
68433
N
0.448
Thhalv10015680m.g
Eutrema salsugineum
Thhalv10015680m.g
N
0.447
GF20527
Drosophila ananassae
FBgn0097533
N
0.446
AWRI1499_3370
Brettanomyces bruxellensis
AWRI1499_3370
N
0.441
PPAI008151
Phlebotomus papatasi
PPAI008151
N
0.440
Cla016375
Citrullus lanatus
Cla016375
N
0.439
PFICI_01816
Pestalotiopsis fici
PFICI_01816
N
0.438
PODANS_7_7190
Podospora anserina
PODANS_7_7190
N
0.432
ANCDUO_24624
Ancylostoma duodenale
ANCDUO_24624
N
0.430
DICVIV_04699
Dictyocaulus viviparus
DICVIV_04699
N
0.430
GPLIN_000530400
Globodera pallida
GPLIN_000530400
N
0.430
WUBG_10398
Wuchereria bancrofti
WUBG_10398
N
0.429
NechaG59892
Fusarium solani
NechaG59892
N
0.428
estExt_Genewise1.C_sca_3_chr4_2_00418
Nectria haematococca
estExt_Genewise1.C_sca_3_chr4_2_00418
N
0.428
36550
Aureococcus anophagefferens
36550
N
0.427
67303
Aureococcus anophagefferens
67303
N
0.427
HmN_000301900
Hymenolepis microstoma
HmN_000301900
N
0.427
CaO19.400
Candida albicans
CaO19.400
N
0.425
CaO19.8030
Candida albicans
CaO19.8030
N
0.425
GLOINDRAFT_346686
Rhizophagus irregularis
GLOINDRAFT_346686
N
0.425
fgenesh1_pg.C_scaffold_11000031
Sporobolomyces roseus
fgenesh1_pg.C_scaffold_11000031
N
0.423
fgenesh1_pg.6__126
Bigelowiella natans
fgenesh1_pg.6__126
N
0.422
GLOINDRAFT_25375
Rhizophagus irregularis
GLOINDRAFT_25375
N
0.421
GLOINDRAFT_83691
Rhizophagus irregularis
GLOINDRAFT_83691
N
0.418